YALI0D26642g

Overview

Description similar to uniprot|Q01961 Pichia pastoris PAS10 Peroxisome assembly protein
Locus type CDS
Locus tag YALI0D26642g

Location

Species Yarrowia lipolytica Positions 3546592..3547868
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1277 (nuc.)
Previous locus YALI0D26620g Next locus YALI0D26664g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26642g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26642gYALI0D26642g_mRNA-001YALI0D26642g_CDS-001

Nucleotide sequence

 

>YALI0D26642g
ATGGACTACTTTTCGTCACTCAACGCGAGCCAGCTGGATCCTGATGTGCCCACACTGTTT
GAGCTTCTGTCTGCTAAACAGCTGGAGGGTCTGATTGCCCCTTCGGTTCGATATATTCTT
GCATTCTACGCCCAGAGACATCCGCGGTATCTACTGCGAATCGTCAACCGCTACGACGAG
CTGTACGCGTTGTTCATGGGTCTGGTGGAGTACTATAATCTCAAGACATGGAATGCCAGC
TTCACAGAAAAGTTCTACGGTCTGAAACGAACACAGATCCTGACGAATCCCGCACTGAGA
ACACGCCAGGCCGTGCCGGATCTGGTCGAGGCTGAAAAACGGCTGAGCAAGAAGAAAATC
TGGGGATCACTCTTTTTCCTCATTGTGGTGCCATATGTGAAGGAGAAGTTGGATGCGCGA
TACGAGAGACTCAAGGGCCGGTACCTAGCTAGGGATATCAATGAGGAGCGAATCGAGATC
AAGAGAACAGGTACGGCCCAACAAATAGCAGTCTTCGAGTTTGACTACTGGCTTCTCAAG
CTCTACCCCATTGTCACCATGGGATGCACCACTGCCACCCTGGCCTTCCACATGCTCTTC
CTCTTCTCCGTCACGAGGGCGTATAGCATTGATGACTTCCTGCTTAACATTCAGTTCTCT
CGAATGACCCGGTACGACTACCAGATGGAGACCCAGAGAGATAGCAGAAACGCTGCTAAC
GTGGCCCATACCATGAAGTCCATCTCCGAGTACCCCGTTGCAGAGCGTGTGATGCTGCTG
CTCACAACAAAGGCTGGAGCCAACGCCATGCGATCTGCTGCTCTTAGCGGCCTTTCGTAT
GTGCTTCCCACTTCTATTTTCGCCCTCAAGTTCCTTGAGTGGTGGTACGCGTCTGATTTC
GCTCGACAGCTGAATCAAAAGAGACGAGGAGACTTGGAAGACAATCTTCCGGTGCCAGAT
AAGGTCAAGGGAGCCGACAAACTTGCGGAGTCCGTGGCAAAGTGGAAGGAGGACACCTCC
AAGTGCCCTCTCTGTAGCAAGGAGCTGGTCAATCCTACAGTCATTGAGTCAGGTTATGTG
TTTTGCTACACTTGCATTTACCGACATTTGGAGGATGGAGACGAGGAGACAGGCGGTCGA
TGTCCCGTGACTGGCCAGAAGCTGCTGGGATGCAGATGGCAGGACGATGTATGGCAGGTG
ACCGGTCTGAGACGACTGATGGTGTAACGATACATACTATAGCATAACATGTACATTTAA
ACGCATCTTTTATCTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26642g_CDS-001

Protein length: 409 aa.
Product: Peroxisome assembly protein, protein

>YALI0D26642g_CDS-001 MDYFSSLNASQLDPDVPTLFELLSAKQLEGLIAPSVRYILAFYAQRHPRYLLRIVNRYDE
LYALFMGLVEYYNLKTWNASFTEKFYGLKRTQILTNPALRTRQAVPDLVEAEKRLSKKKI
WGSLFFLIVVPYVKEKLDARYERLKGRYLARDINEERIEIKRTGTAQQIAVFEFDYWLLK
LYPIVTMGCTTATLAFHMLFLFSVTRAYSIDDFLLNIQFSRMTRYDYQMETQRDSRNAAN
VAHTMKSISEYPVAERVMLLLTTKAGANAMRSAALSGLSYVLPTSIFALKFLEWWYASDF
ARQLNQKRRGDLEDNLPVPDKVKGADKLAESVAKWKEDTSKCPLCSKELVNPTVIESGYV
FCYTCIYRHLEDGDEETGGRCPVTGQKLLGCRWQDDVWQVTGLRRLMV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG