| Description | similar to uniprot|Q04217 Saccharomyces cerevisiae YMR128W ECM16 Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0D26620g |
| Species | Yarrowia lipolytica | Positions | 3542396..3546352 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Sense |
| Chromosome | YALI0D | Total length | 3957 (nuc.) |
| Previous locus | YALI0D26598g | Next locus | YALI0D26642g |
Here is a representation of the structure of the locus YALI0D26620g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0D26620g
ATGGCGAAATACAAGCTAGGATACAACGCAAAGGCCCGAGCCGGCTCGCTGAAGAAGCAG
CAGGAGCTCAAGGCCGCCAAGCAGAAAACCTGGGTCAAGAAGCCTACAGCAGAGGAGGAG
GAAGAAGACGCCAATGCCGAGCTCATGGTGCCCAAGAGTGAGGCCGAGAAGGAGGCTCGA
AAGAGAAAGCTCCAGGAAGAGCTCACACCTACGGAGAGCAAGATGACTTCAAAGAAGCGA
AAGCGTCTAGACAAGTACATTGTGAGTATGACACGAGGATACGTCGCAGGTTTAGCTTAA
CCAGATTAGCTGAACCAGATTAGCTGAACCAAGGACATTCGCTGCGCTTATGATTACATA
CTAACTCAGGAAAAACAACTCAAGAGAGAAGAGAAGAAGGCATTGTTTTCCGAGTTTGCT
GCTCGAAAGGGCACCTTTGATACATCTCAGCTCAAGTCTATGAAACACATGGGTGACAAG
GAAACCAAAAAAGCCCGGATCGAGGAAGCTTTGCGTCTGGAGAAACTGGGTCTCGGTAAT
GAGGAGACCAAGGAGATTCTGTACGAGAAACACGATCACGAAGAGTGGGATGACGAGAAG
CATTCTCATCTCCTGACTGAGCTGGAGCGAAAGGAGAAGCAAATGGCCGAAGAGGAAGAG
CAGGAGAACAAAAGCTCATTCATTGACATGCGACCCAAGGCTGGTGGTGGTTTCGGTTTC
CAGAACCTGGCCAAGGTTTCCAAGCCCGCAAAAAACTCTTACTCTTGGCGAAAGAAGCTC
GAGATTGAGCGTGCTCGAAAGAACAAGAAGGACTACGTTAGCTCCGGGGAGGACGACGAT
ACCGATTCTGATGAGGAGGATTCTGACGAAGATTCAGACGAGGATTCGGATGAGGAGTCT
GAGGAGTCAGAAGAGGAAGGCACCAAAAAAGTGAAGGTGGCTGCCGAGGAGGAGATCGAG
GAAGATGTCGAGGAAGAGGAAGAAGAAGATGAAGACGAGCAGGAGGAGGAGGATGAGGAC
GAAGATGAGGACGAGGAAGAGGAAGACGAGGAAGATGACGAGTATACCGAAATCGTCACC
AAAAAGTCAAAGGGTTCTTCTTTCAAGGAATGGATCGATGAACAGTCTGGACCCAAGTCT
TCCAACATCGAGGATCTCTCGCATATCAAGATCAAGAAAGAAAGAGTGGACAGAGACGAG
GACCGCCTTACTCCTCCTCCCGAAGACATTGCCCAACCCGAGTACGCCAAAAGAAAGGCC
TTTTATGTCAACGTTCAGCGAGACCCTGAAATCCAGACCTCCCGAATGAACCTTCCTGTC
ACCGGAGAAGAACAGAGAATCATGGAAGCCATTTTCAACAACGATTGTGTCATCATCTGT
GGTGAAACTGGTTCAGGTAAGACTACACAGACTCCTCAATTCCTGATCGAGGCGGGTTTC
GGAACGAAGGGTAGTGACTACCCTGGTATGATCGGTGTCACCCAGCCTCGACGAGTGGCC
GCCATCTCTATGGCGCAACGTGTTGCTAACGAGTTGGGTAACCAAGGTGATAGAGTTGCC
CATCAGGTGCGATTCGATGTCACCGTGAAGGATAATACAGCTCTCAAGTTCATGACTGAT
GGTGTGTTGCTGCGAGAACTGTCCCAAGACTTTGCTCTTACCAAGTACTCTGCTCTGGTA
ATTGATGAGGCCCATGAACGTAACATCAACACTGATATTCTCATTGGTGTGCTTTCTCGA
GTTCTCAAGTTGCGAAAGGAGATGTTCAACGAAGGCAAGTGCGAGTCTCCCCTCAAGCTC
ATTATCATGTCTGCTACTCTGCGGGTTTCCGATTTCACAGAGAACAAGACTCTTTTCCCA
GTTCCTCCTCCTGTTCTCAAGGTTGAGGCCCGACAATATCCCGTTTCTGTCCACTTCAAC
AAACGAACAACTTACGACTACATGGACGAGATCTACCGAAAGACCTGCAAGATCCACAAA
CGACTGCCCGATGGTGGTATTCTGATCTTCCTGACTGGCCAAAACGAGATTGTTAACGTG
GTCAAGCGGCTTCGGAAGGCCTTCCCTGATCGAACTAAGGTGTGGCGGCCCAAGGACAAG
TCTGAGGATCTCCAGGTCAAGGTGTCTGCCAATGAGACTGTAGTGGAGGCCGAGGAGGTT
GATTTTGGCGCCGATATGCGACAACAGGACTATGCTGCTGTCGAGGGAGAGTCTGAGACA
GATGAGGAGGACGGAGAAGAAGGTTTCGAAGAGGAGCTTGCTGTCGAGGAGCGAAATGAG
TCTGCTCCTCTGCACGTGCTTCCTCTTTACTCTCTGCTGCCTACCAAGGAGCAGATGAAG
GTGTTTGAGGAGGTTCCTGCCGGCCATCGACTGTGTGTCGTTGCTACTAACGTTGCTGAA
ACTTCGCTGACCATTCCTGGTATCAGATATGTGGTTGATTGTGGTCGAGCAAAGGAGCGA
AAGTACGATGAAGAGACTGGTGTTCAGTCCTTTGAGGTTGATTTCATCTCCAAGGCTTCT
GCCGATCAGCGAGCTGGTCGTGCCGGTCGAACTGGTCCCGGTCACTGCTACCGTGTCTTC
TCATCTGCCGTCTATGAGGAGTTCTTCCCTCAATTCTCCATCCCCGAGATTCTCCGATGC
CCTGTTGAGGGCATTGTTCTGGAGATGAAACACATGGGTATTGACAAGGTGGTCAACTTC
CCCTTCCCCACTCCCCCCGACAGACAGTCCCTGGCCAAGGCCGAGAAGCTGCTGGAGTAC
CTAGGTGCCCTCAGCAACACTGGTGTTATTTCTGATATGGGTAAGCAGATGTCTCTGTTC
CCTCTGTCCCCGCGATTCGCCAAGATGCTCATTATTGGTTCTCAGCTCGAGTGCCTGCCT
TACATGGTTGCCATTGTTGCTGCTCTCACAGTTGGAGATCCCTTCATTGGAGAGCACGAG
CTTGGCATCAATGAGAAACCACAGAAGCCCAAGGTTGAGGAGGTTGATGAAGACGGAGAC
CGGATTAAGAGCAACGAGTCTGACTCCGAGCCCGAGGACATTTACGAGATTGAGCGAAAG
CGAAAGCTGCGATCCAGCTACCATAAGGCCCAGGCAAAGCTGGCCTCCCTGGACCCTGCA
TCTGACGCTCTGAAGCTGCTCTCTGCCGTCTGCGCCATGGACTACGATTCCGACCTGGAG
AACTTCTGCAAGGGCTTCTTCCTGCGACACAAGCTGATGGAGGAGATGCGAAAGCTGAGA
CAGCAACTGAGCCGAATCGTTGTGGCCAACTCCGACCCTCGAGCAGCTCCTATGCTCAAG
GAACAGTTGAATGCCAAGCTCAAGCCTCCTTCTAAGCTCCAGATCAAGGCTCTCAAGCAG
ATGATTGCCACTGGTTTTGTTGACCAGGTGGCTCAGCGTCTGGACAAGGTCAGCGAGGAC
TACAAGCTCACTTCTCGAGAGCGAATCATCAACGTTCCCTACCAGACTCTGTTCCCCACC
TCCACCACCAACAAGAAGACTGACGACCAAGGAAACCCTCTGCCTGACGACACTCAGGTG
TTCATTCACCCCGGATCTGTCATTAACACTATGGGAACTCATCCTCCCGAAATGTTGGTA
TTTGCTTCCGTCAACCGATCGGGATCTTCCAAGCTGAGAATCAAGCCTCTCTGTGATATC
ACATCTGCCCAGATTGGCAACATTGCCAAGGGCACTGCTCTACTCACATACTCCAAGCCC
CTGCCTCCCCCCTACGGCCCCAAGATGATCACCAGTACCTCTCGAGAGTGTTGGGTGGTT
CCTCGGCTGGGAGCTGCTATTGGCTCTGGAGGCACTGGATGGGATCTGCCTCCTATTAAG
GTGAAACAGGAGAAGAAGGGTAGCCAGTGGGTTACCTTGTAAAAATTGCCATAGCAACAA
ACGAACAAAAACCATAGCATGTTTATATTGTATTAGATTTCTTCATAATTTTAGGGA
Locus sequence
Up/downstream sequence
Protein length: 1258 aa.
Product: Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, putative
Browse the locus neighborhood with JBrowse:
ATG