YALI0D26576g

Overview

Description similar to uniprot|Q04675 Saccharomyces cerevisiae YMR059w SEN15 tRNA splicing endonuclease delta subunit singleton
Locus type CDS
Locus tag YALI0D26576g

Location

Species Yarrowia lipolytica Positions 3540205..3540618
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 414 (nuc.)
Previous locus YALI0D26554g Next locus YALI0D26598g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26576g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26576gYALI0D26576g_mRNA-001YALI0D26576g_CDS-001

Nucleotide sequence

 

>YALI0D26576g
ATGGCTGAACAAATAAGAACCAACCTTGTTCATCAGCATCTGTGGAGCGACGTGGTCATC
CACCAGACTAAGCTCACAGACCTGGTGCATGGAACTCCACCCAGGACTTTGCACCCTGAT
GACGCTGAGATCAGATCGGAATGGCTAGTACCTGCCAGATCCAACGACGACTGGACTATC
AAGCAGTGGGACGAGTGTTTTCGCGAGGCTGAGGGTGTGGCTGGAAAAGACGTCGATCGC
ATGCTAATGGCCATCGTGGACAATGACTCCACCATCGTCTACTACTTCGTCTACAAGGGT
CTGGTCAAGCCTCGAAAGAACTAGATTCACAACTATTATACACCCTGTTCCGTTATGATC
CCGGTCCAGGCATTATCACCTTGCATTATAAATATATGTACATTACATGAAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26576g_CDS-001

Protein length: 108 aa.
Product: Subunit of the tRNA splicing endonuclease, putative

>YALI0D26576g_CDS-001 MAEQIRTNLVHQHLWSDVVIHQTKLTDLVHGTPPRTLHPDDAEIRSEWLVPARSNDDWTI
KQWDECFREAEGVAGKDVDRMLMAIVDNDSTIVYYFVYKGLVKPRKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG