YALI0D26488g

Overview

Description similar to uniprot|Q9C0V7 Schizosaccharomyces pombe Putative arylsulfatase
Locus type CDS
Locus tag YALI0D26488g

Location

Species Yarrowia lipolytica Positions 3530159..3531829
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1671 (nuc.)
Previous locus YALI0D26466g Next locus YALI0D26499g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26488g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26488gYALI0D26488g_mRNA-001YALI0D26488g_CDS-001

Nucleotide sequence

 

>YALI0D26488g
ATGCCCCACTCACAGAAACGACCCAATTTCCTCATTATCGTTGCCGATGATCTGGGATGG
TCTGACACCCAGCCCTTTGGAGGAGAGATTCACACTCCCAATCTCGAGCGACTGGCCAAG
TCTGGAGTCAGATTTACCGACTTCCACACCGCCTCCGCCTGCTCTCCTACGAGATCCATG
TTGTTCTCGGGTACAGACAACCACATCGCTGGCCTTGGGCAGATGGCCGAGACCGTGAAA
CGGTTCACTGAGTTCCAGGGAAAGCCCGGATATGAGGGGTATCTTAACGATCGTGTGGCC
GCTCTTCCTGAGCTTCTGTCTGATGCTGGCTACCACACTATTATGAGTGGAAAGTGGCAT
TTGGGCCTTGTTCCTGAACGGTTCCCTTCCGCTCGAGGATTCCAAAAGTCGTTTGCTCTT
TTGCCTGGTGGAGCCAACCACTATGCCTTCGAGCCTGGAACCAAAGACAAGCCCGCTGTG
CCTTTCCTGCCTCAATTGTACGCTCAGGACAAGGAGTATGTTGAGGTCGACGACTCCCAC
TTCTACTCCTCTGATAGCTTTACCGATACTCTGCTGGAGTACATCGAGGAAAAGCCCAAA
GACAAGCCCTGGTTTGCCTACTTGCCCTTCACTGCGCCCCATTGGCCTCTCCAGGCCCCC
AAGGAGTATATTAACAAGTACAAGGGCAAATATGACGAGGGTCCCGATGTTCTGCGAGAA
CAGCGACTCAAGGAACAGGTGAAGCTGGGGCTAGTTGGAAAAGACGTTGTCAGTGCCCCC
ATTCTTGCCGACAACGAGACTGAATGGCATGACAAGACTGCGGAAGAAAAGGCTTACTCC
GCCCGAACAATGGAGATCTACGCAGCCATGGTGCAAAAGATGGACGAGAACATTGGACGG
GTGCTGGATCACCTCGAAAAGACAGGAGAGATCGACAACACCTTCATCTCTTTCATGTCC
GACAACGGAGCCGAGGGTGCTATTCTTGAAGCCATTCCTCTTCTGACCAACGACCTCAAC
GAGAAATACTTTGACAATTCTATTGAAAATATCGGAGCCAAGAACTCGTTCATCTGGTAC
GGTCCCCGTTGGGCCCAGGCTGCTACCGCCCCTGCCAAGTACACTAAGGGTTACATCTTC
GAGGGAGGTATTCGATGTCCTCTTATTGTCAGATATCCTGGATTTGAGAATCCCGGATCC
ATCTCTAACGAGTTTACTACCGTCATGGACATTCTTCCTACTGTTCTCGAGCTGGCAGGA
GTCACTCATCCTGGAACAAACTACAAGGGCCGAGAGGTGGTGGTCCCCAAGGGAGTATCC
TGGGTCTCTAACCTGTCGGGAAAGTCCAAGGAGGCTATCCACAGCAACACCCATTTCACT
GGATGGGAGCTCTTTGGACAACGTGCTATCCGAAAGGGCAACCTGAAAGCCATTCTTGCT
CCTGAAGAGGGCAAAGAGGATACCTGGGAGCTCTACGATCTGGATGCTGACTTTGGTGAA
ACCAAAGACCTGGCAAAGACACACCCTGATGTCCTGAAGGAGCTGGTCGAGCTGTGGTAC
CTCTACGAGGGGGATTGTGGAGTCTTTATTCCTGACAATGCCGACCAGATGAACCTGCGA
AAAATGCTCAAGGAGAACCCTCGTCGTAAGGCATGGGGCGAGAAGAAATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26488g_CDS-001

Protein length: 557 aa.
Product: Arylsulfatase, putative

>YALI0D26488g_CDS-001 MPHSQKRPNFLIIVADDLGWSDTQPFGGEIHTPNLERLAKSGVRFTDFHTASACSPTRSM
LFSGTDNHIAGLGQMAETVKRFTEFQGKPGYEGYLNDRVAALPELLSDAGYHTIMSGKWH
LGLVPERFPSARGFQKSFALLPGGANHYAFEPGTKDKPAVPFLPQLYAQDKEYVEVDDSH
FYSSDSFTDTLLEYIEEKPKDKPWFAYLPFTAPHWPLQAPKEYINKYKGKYDEGPDVLRE
QRLKEQVKLGLVGKDVVSAPILADNETEWHDKTAEEKAYSARTMEIYAAMVQKMDENIGR
VLDHLEKTGEIDNTFISFMSDNGAEGAILEAIPLLTNDLNEKYFDNSIENIGAKNSFIWY
GPRWAQAATAPAKYTKGYIFEGGIRCPLIVRYPGFENPGSISNEFTTVMDILPTVLELAG
VTHPGTNYKGREVVVPKGVSWVSNLSGKSKEAIHSNTHFTGWELFGQRAIRKGNLKAILA
PEEGKEDTWELYDLDADFGETKDLAKTHPDVLKELVELWYLYEGDCGVFIPDNADQMNLR
KMLKENPRRKAWGEKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG