YALI0D26257g

Overview

Description weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase
Locus type CDS
Locus tag YALI0D26257g

Location

Species Yarrowia lipolytica Positions 3490069..3492042
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1974 (nuc.)
Previous locus YALI0D26235g Next locus YALI0D26279g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26257g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26257gYALI0D26257g_mRNA-001YALI0D26257g_CDS-001

Nucleotide sequence

 

>YALI0D26257g
ATGAAGTTCCCAATCGCCACCCTGGCAGCTGTTGCAGCTGTGGTTTCCGCTCAGTACAAC
CTGTACAATGCGACCAATGGCACGACTACTATTTCTTCTTCAGCTTCTCCTTCGACCAAC
TACTCTGCCTCTTTGACCACCTCTTCCTCTTGGTCTGATGATGGTACCCATACCACTCTG
CCCATTTGGTCCGAACTCATGTCGGACATTTCTTCTCTGGAGTCAATGTGGAACAACAGG
ACCACTTCGGCCGAGTCTGTTGGTCCCACCACCTATTACGTCGACAGCTCCACTCCGGTG
GAATCTTCTACGTTCTCCTCAGCTTCTTCTGCTTGGAACACTTCCACTGCGATCTTGACC
GCTTCCAACACCTCGACCATTGCGTATCCTACTAATGTTGAACGAGCTGTTCCAGTTCCC
ACCGGGTTTGAGGACGGCGACGAGTATGACTATGATGAAGACACAGAGGACGAGGACGAT
GACGAAGATGAGGAATACTGGTACTCCACCTCTGCTCTGTGGAACACCTCTACCGCTCAG
GCTACACCTACTCCCATTTGGAACACGTCTACCTCCTCCACCACTCTCTGGAATACCTCC
ACTGTCGTGTGGACTGAGACTGCTACCTCGTCTACCCCTGCCTGGAACTCTTCAACCTGG
TGGACCGAGTCTGAGACGCAGACTTCCACCGCTTGGAACACATCCATTTGGTGGACTTCT
TCTTCTTCTTCTTCTGCTTCCCCCACTACTCTCTGGAACACTTCTTCTTCAGCCACTCCT
ACGCCCATTGTGAACACCTCTTCCTGGGTCTGGAGCTCCGTCGAGTCCTCAGCTAGCCCC
ACCTCGATCTGGAACTCTTCCACTACTGCTCCCATCTATGAGCGAGACTTTGACACTACC
TCGTCTTCTTCCATGAACTGGACCTCCTGGTACCACCACACTGTCTCGACTTCTTCCTGG
TATTCTGGAGACCCCGAGTCCACCTCCAAGGCCGTGACCACCTCTCACGCTACAGCCACA
TCTTCTGTCTGGTCCAACTCTTCCACCGAGACGAAGTACTCTAGCTCCACCTGGTACAAC
TCTTCTACTGCTGCCTACCCCACGAGCTCTTCTATTTCCGAGAACAGCGAGTACTGGAAT
CCCGTTCCCGTCAACTCCACCATCATTTCCCCTCCATACCAGCGACACCGACAGAACACG
TCTACCTGGTCTGAGTCTGCACCCACTTCTTCGTACGTGTCCAACACAAGGAACTCCTCC
ACCGCCTATCCTACTACCTGGTACAACTCATCCACCCTCTGGTCCTCCATCCCCATCAGT
GTCCCCACTGGTATCTTCAACATCACTACTCCTCTGACCACAGCTGCTCCCACTACTCCC
TCGTACAATACCTCTCTGGGTTTCGAGGAGCGAGACTATGAGACTGACGACAGCTACTGG
GAGTCCGAATATGAGGAATACGAGGACTGGGAGGACGAGACGTCGACTGAGTACTCCTGG
ACCACCAGCAGCAGCAATTTCTCCACCGCCTGGCCTTCTTCTTCATCCTCTTCCACCTGG
TGGACTTCTTCTTCGGCCTTCAACTCTTCCACTCCTGTGACTTCTTACATCTGGCCCACC
TCTTTGGTCAACACCTCTACCATCTGGTCTTCCAGCTATGTGGCTAACACCACCACCACC
GTGGCCTTCTCCATTCCTACCACCAACTCTTCTCGATCTACCCGATCTGCCCGATCCAGG
TACTCTTCCTCTTCCTTCTCTACTCCCTCGACCACTTCTACTGATATCCGGACCTCTTGG
GCCCCCGAGGATCTCATCGAGCAGCCTGAGCCCACTACCAGCTCCTCCCACTTTGACGAT
GCTCCGTTCCCTACCGCCCCACTGCCTCCCCTTGAGTCTGGAGACGAAGCACCTCTGGAA
ATGCAGTACCCTGACTCCTTTATCGATCTCCCCTGGGTTGATTACGAGAGTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26257g_CDS-001

Protein length: 658 aa.
Product: Conserved hypothetical protein

>YALI0D26257g_CDS-001 MKFPIATLAAVAAVVSAQYNLYNATNGTTTISSSASPSTNYSASLTTSSSWSDDGTHTTL
PIWSELMSDISSLESMWNNRTTSAESVGPTTYYVDSSTPVESSTFSSASSAWNTSTAILT
ASNTSTIAYPTNVERAVPVPTGFEDGDEYDYDEDTEDEDDDEDEEYWYSTSALWNTSTAQ
ATPTPIWNTSTSSTTLWNTSTVVWTETATSSTPAWNSSTWWTESETQTSTAWNTSIWWTS
SSSSSASPTTLWNTSSSATPTPIVNTSSWVWSSVESSASPTSIWNSSTTAPIYERDFDTT
SSSSMNWTSWYHHTVSTSSWYSGDPESTSKAVTTSHATATSSVWSNSSTETKYSSSTWYN
SSTAAYPTSSSISENSEYWNPVPVNSTIISPPYQRHRQNTSTWSESAPTSSYVSNTRNSS
TAYPTTWYNSSTLWSSIPISVPTGIFNITTPLTTAAPTTPSYNTSLGFEERDYETDDSYW
ESEYEEYEDWEDETSTEYSWTTSSSNFSTAWPSSSSSSTWWTSSSAFNSSTPVTSYIWPT
SLVNTSTIWSSSYVANTTTTVAFSIPTTNSSRSTRSARSRYSSSSFSTPSTTSTDIRTSW
APEDLIEQPEPTTSSSHFDDAPFPTAPLPPLESGDEAPLEMQYPDSFIDLPWVDYES*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG