YALI0D26235g - GPI7

Overview

Description uniprot|Q96X26 Yarrowia lipolytica YALI0D26235g GPI7 Required for addition of a side chain to the glycosylphospatidylinositol (GPI) core structure
Locus type CDS
Gene name GPI7
Locus tag YALI0D26235g

Location

Species Yarrowia lipolytica Positions 3486872..3489511
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2640 (nuc.)
Previous locus YALI0D26213g Next locus YALI0D26257g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26235g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26235gYALI0D26235g_mRNA-001YALI0D26235g_CDS-001

Nucleotide sequence

 

>YALI0D26235g
ATGCTCTGGAAAAGGTGGACTTTGGCCGTGACCATTGTGGTGCTGCAGCTTGCTGCGGTG
TTACTATTTGCCCGCGGGTTTCTGCCCTCACGTGTCTTGCTTCCTGGATACACCGAATCA
CGTGTTTCCACCGAGGCGCCTTTCCAAAAGGCCATCATCATGGTGGTGGACGCGTTTCGA
AGCGATTTCGCATTTTCGGACCAAAGCAATTGTCCACAACTTCACAAGCGCATTAATTCC
GGTGGCGCTATCCCTTTCACGGCCCATTCGACGCCTCCAACAGTCACTTTACCCCGTATC
AAGGGTTTGACAACTGGATCGACGCCAAACTTTTTGGACGCGGTTCTCAACATTGCCGAG
AGCGACAATTCGTCCACGCTAGCTAACCAGGACTCGTGGCTGGCCCAGGCGTCCCGTGAT
GGCCGCAAAATCCACATGTTTGGAGACGACACCTGGATCAAGCTGTTCCCAGGCATGTTT
GACGACTGTGAAGGAACTGCCTCCTTTTTTGTGTCGGACTACACAGAGGTGGATAACAAT
GTGACGCGTCATATTGACACCCAATTGGACCAGAAAACCGAGTGGGATGTGCTGATTCTG
CACTATCTCGGTTTGGATCATATTGGACATAAGACTGGTCCTGAATCTCCATTTATGCCT
GCCAAACAGAAGGAGATGGACGATATTTTCGACAAGCTGTACAACAGCTGTGACGACGAC
ACGGTGCTGATTCTTCTGGGCGATCACGGCATGAACGAGGTCGGAAATCACGGAGGAAGT
AGTGCTGGAGAAACATCTGCGGCCATGGTTTTTGCTTCTCCCAAATTTGAAACAGCTCAG
CTTACTGAAACAGCGGAGACTTCTCCTTTGCCCTGGACAGACACCTACAAATACCACTCC
AGAATGGACCAGACGGATCTGGTGCCTACTCTGACAGCACTTCTGGGCCTCAACACTCCC
AAAAACAACTTGGGAGTGCTAGTGTCTCAAATGCTGGGTCTTTGGTCTCCCGAAGATCAG
CTCAATGTGCTCAAAAACAATGCAGATCAGATGGTCCAGATTTTACAGGGCCAAGCGTCA
CGCGAAAGTGACGCCAAAGAGGTCTACGAGCTGTACGACACTCTCAACAGCAACCCCTCA
GTTAAGGACTACTACAACTTTTTATATGAGGCCCAGTCGTACCTGACTCATGCATCTTCC
AACTATAATACTAACGATATGCTCGGTGGTATTGGTCTGGGTCTCCTATCTACCATTCTG
GCTCTGACCGTCTTCTCAGCCCTGACTCTTGCAGTTCAGGGGCTGAAACGGCTCTATCTC
ATCATTCTGCTGGTCTATTTCATTTCCGTATTCGGCTCGTCTACTGTGGAGGAGGAGCAC
CAAATCTGGTATTGGATCACATCAGGCTGGATGGCGTTTCTGTACATTTCCGGCAGCCGT
AACAAGTTTGGAGACGGTTTCAACTGGATGTTTGTACAGGTCTTCGTGCGAATGATGATC
TCCTGGAACCAAACGGGCCAAAAATTCACCAAGAAGGACGACATAGTTACGTGGCTGTCC
AAGGACGGCAACCACCCAGTTCTCTGGATCCTTATTCTCGTCACCTACGGAGTGGCTTTC
AACAAGGTATGGAGATACGGATTTTCCAAGGTTGAGTCCAAACTGGCCTTTCTGCTCACT
CTCATTACCACTTTTGCCTCTGTGGGCTTCAAAATTACCCAGGCCTGGGAGGCCGGAGAG
GTTGTCCCTGCTCCCCTGCTCTATCTGATGGGCCTACCCGGTACTTTGAACGAGGTGAAC
GCTCGAATGGCCGGCCTGGCTCGGTTTGCCTTCTCCACCATTGCAGCAGGCTCCCTGTAC
CGAGTCCTGAGTTTGGCCGGGACCGATAAGGTTAATCTCATCCGCGACTTGCATGCGTTC
CTAACTCTGTTCCTCATCACGCAGTCGCGGATCCAAAACATCCCGCTGTTTATGGTGTAC
TACTTTCTAGAGATTTTCTTACGAAAGGCCACCAACCGGTCCTTTATCTTCTCATCACGT
GACATTTACCAGACGGAGGCACTATTCCAGAAGCTCGTTCTGGTGCTGTCGGTTTCGACT
CTACTTCTTGAGCAGGTGTCATTCTTCTCAATGGGTAACTCCAACAGTATGGCGTCCATC
GACCTGTCTAACGCCTACAATGGCGTCACACTCTACCAGATTGAGTTTGTGGGCGTGTTG
ACGTTTGTGTCCAACTGGATTGGCCCTCTGTACTGGTCCACAGCCGGACTCAGTTTCCTG
CTTGAAGATCACGTTCGAAACGCCATCTTTGCCAAGATTGCCGAGAAGAACAATGACGTC
AAGCTGACGACTAAGCTGGTGCAGCAGGCGCTGACGCTGCGAGTCTACGTGGTTTTGGCC
TTTTCCAGTGTGGCCATTTCGGCGGTGATGATCACTTGCTTTTTCCTCAGAGAGCATCTC
TTCATCTGGACAGTCTTTTCTCCCAAGCTGTTGTATCAGTTTGTGTGGACGGTGTTGCAA
TTTGCGCTGGTTGATGTGATTCTCAGCAGCATTTTTGTCGTCCTCGTATATAGATCGGTG
TAAATAATATAGATAATTACGTAATTTAATATTTGAGACGTGTTGTGTCTTCTCCACCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26235g_CDS-001

Protein length: 861 aa.
Product: Required for addition of a side chain to the glycosylphospatidylinositol (GPI) core structure
Gene: GPI7

>YALI0D26235g_CDS-001 MLWKRWTLAVTIVVLQLAAVLLFARGFLPSRVLLPGYTESRVSTEAPFQKAIIMVVDAFR
SDFAFSDQSNCPQLHKRINSGGAIPFTAHSTPPTVTLPRIKGLTTGSTPNFLDAVLNIAE
SDNSSTLANQDSWLAQASRDGRKIHMFGDDTWIKLFPGMFDDCEGTASFFVSDYTEVDNN
VTRHIDTQLDQKTEWDVLILHYLGLDHIGHKTGPESPFMPAKQKEMDDIFDKLYNSCDDD
TVLILLGDHGMNEVGNHGGSSAGETSAAMVFASPKFETAQLTETAETSPLPWTDTYKYHS
RMDQTDLVPTLTALLGLNTPKNNLGVLVSQMLGLWSPEDQLNVLKNNADQMVQILQGQAS
RESDAKEVYELYDTLNSNPSVKDYYNFLYEAQSYLTHASSNYNTNDMLGGIGLGLLSTIL
ALTVFSALTLAVQGLKRLYLIILLVYFISVFGSSTVEEEHQIWYWITSGWMAFLYISGSR
NKFGDGFNWMFVQVFVRMMISWNQTGQKFTKKDDIVTWLSKDGNHPVLWILILVTYGVAF
NKVWRYGFSKVESKLAFLLTLITTFASVGFKITQAWEAGEVVPAPLLYLMGLPGTLNEVN
ARMAGLARFAFSTIAAGSLYRVLSLAGTDKVNLIRDLHAFLTLFLITQSRIQNIPLFMVY
YFLEIFLRKATNRSFIFSSRDIYQTEALFQKLVLVLSVSTLLLEQVSFFSMGNSNSMASI
DLSNAYNGVTLYQIEFVGVLTFVSNWIGPLYWSTAGLSFLLEDHVRNAIFAKIAEKNNDV
KLTTKLVQQALTLRVYVVLAFSSVAISAVMITCFFLREHLFIWTVFSPKLLYQFVWTVLQ
FALVDVILSSIFVVLVYRSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG