YALI0D26213g

Overview

Description weakly similar to uniprot|Q96WJ8 Blumeria graminis Protein kinase C-like protein
Locus type CDS
Locus tag YALI0D26213g

Location

Species Yarrowia lipolytica Positions 3483875..3485387
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1513 (nuc.)
Previous locus YALI0D26191g Next locus YALI0D26235g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26213g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26213gYALI0D26213g_mRNA-001YALI0D26213g_CDS-001

Nucleotide sequence

 

>YALI0D26213g
ATGGGACAAGCTCAAACTCGACTTGCGGACGAAGACCCCGAGGAAGCAAGCCGACGACGA
GAGTCGTTTCTTCCCCAGGCGCCGCCCAAGAAACCCAAGGTGCCCCCTCCCTACGTATCC
GATCCCATGATGCTCCCCAGCGACTCCAGCACCATTGACAGCAGTGCGTCGCTCGATAAT
CTCGACAACTACGAACTTCTGCAAGTTGTGGGTAGTGGAGCTTTCAGTAAAGTGAGAGTA
GTCAGGCAAATGACCACCAACAATGTATACGCTCTGAAGTACTCTGTCCGAGAAGATATC
GTCAAGCTGGGCCGGACACAATTGATGCTCAACGAACGCCGAATCCTGCTGCGACTGCAG
CACCCATTTCTGTGCAATCTTCACCAGACCTTTTGCGACAGCGAGTATCTCTACACACTG
CTGGACCTCATGACCGGTGGAGATCTCCGATGGCATATTGAACGCAAGACCTTTTCTGAG
GCCACCATCCGCTTCTGGGTGGTCGAGGTGGCCTGTGCTGTGGCCTATTTGCACGAAAAG
GGCGTTGTCCACCGAGATATTAAACCAGACAATATCATGCTGGATGAACTGGGACACGCT
AGACTGGGAGACTTCAACGTGGCTTGTATGCTGCCGTATGGAGAGTACAAGACCGACAGC
GGTTGTGGAACCATTGGCTACATGGCACCCGAGGTGGTCAGAGCGAAATACAACCATCTG
GTCGACTGGTGGAGTTTGGGTGCGGTCTTCTACGAATGTCTGTATGGAACAGTGCCCTAC
AGATACCACTCTACTGACGAATATCGACGAATGAAGCTCAAGGAACACTCGAACTTGTTC
CCCGTGACCCAACCTCAAGTCAGTATGGCTGCCATTGAAGCTCTGGATTTGCTGTTGACA
GTAGAGGCTCAGTACCGCCTGCATGACGTGGACCAGCTGCTGCAACTCAGCTACTTCCGG
GGATTCACTCGACTGGGACTCGAGAAAAAGCTCTACTCTCAACACATGGACAAGGGAGTC
ATGAAGGAAGGAATTGGAGGAACCAACTGGCAGGGACCGGTTTTTGTGCCTGACGCAGAC
GAACTCAACTACGACGAGAGTCTTGATGTCGAGGAGCTACTCATGCTGGACCGAAGTCTA
GTAAACGACCGAGCCCAGGGTTTCAAGAGAAAGAAGTGGACGTCGTCAAACCGTGGTCAG
GTCATTCTCGACGAGGAGTACGTGCCGTTCGAACGCAAGGCATCTCTCAATACGAGCATC
TCGGCATGTGACCTGGTCACACGAAACTGGGGCAACAGAAACCTTAGCGGTAAAAGCAAA
GTCGCCGGTAAACGACGAAGCGGGCCTGAGAGCGGAGTGGTCGCTATGGGAAAGGCCGGT
AAGGGTTCCAGAGTACAGCCCATCAAGCAGTAACTCACCAACAGTAGTTTGGAACACCAC
CAAACAGGATTTTTGGAGACACACACTCTCTCCACTCGTATTTATTCATTGTACAATAGA
TTTTATCGCAGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26213g_CDS-001

Protein length: 471 aa.
Product: Conserved hypothetical protein

>YALI0D26213g_CDS-001 MGQAQTRLADEDPEEASRRRESFLPQAPPKKPKVPPPYVSDPMMLPSDSSTIDSSASLDN
LDNYELLQVVGSGAFSKVRVVRQMTTNNVYALKYSVREDIVKLGRTQLMLNERRILLRLQ
HPFLCNLHQTFCDSEYLYTLLDLMTGGDLRWHIERKTFSEATIRFWVVEVACAVAYLHEK
GVVHRDIKPDNIMLDELGHARLGDFNVACMLPYGEYKTDSGCGTIGYMAPEVVRAKYNHL
VDWWSLGAVFYECLYGTVPYRYHSTDEYRRMKLKEHSNLFPVTQPQVSMAAIEALDLLLT
VEAQYRLHDVDQLLQLSYFRGFTRLGLEKKLYSQHMDKGVMKEGIGGTNWQGPVFVPDAD
ELNYDESLDVEELLMLDRSLVNDRAQGFKRKKWTSSNRGQVILDEEYVPFERKASLNTSI
SACDLVTRNWGNRNLSGKSKVAGKRRSGPESGVVAMGKAGKGSRVQPIKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG