YALI0D26103g

Overview

Description similar to uniprot|Q00313 Candida albicans DNA topoisomerase I
Locus type CDS
Locus tag YALI0D26103g

Location

Species Yarrowia lipolytica Positions 3467005..3469480
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2476 (nuc.)
Previous locus YALI0D26081g Next locus YALI0D26125g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D26103g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D26103gYALI0D26103g_mRNA-001YALI0D26103g_CDS-001

Nucleotide sequence

 

>YALI0D26103g
GCTTCAGACGGCCGCGAAACGCAGAAATCAACGTGTTTTTGATCAGACGGGTCCCGATTC
TTTGTCCGCTTCGCCCTCTGATTCGATCTGTCAATCGACCTATTAATCGATTTGTTCACC
GACCTGTTTCACGACTACTCACAACCATGCCTGCCAGGATCATCACTTCGGATGACGAGG
ACGACCTCATGCCTCCCTCTCGACCCTCCACTGTCAAGCGAGTGAAGGACGAAGACGACG
ACGACGCGCCTGTAGTGAAGAAGGTCAAGAAGGAGTCCTCTACTCCTAAGGCTTCTCCTA
AGGTGAAGAAGGCTACCACCACCACTAAGGTTAAAAAAGAGAGCACAACCAATGCCAAAA
AGGCCCCTGTCAAGAAGACCACCACAACTACCATCAAGAAGGACCCTGTGAAACAGCAAA
CGGTCAAGAAAACCACCATCAAGAAGGAGACGGTCGGAGCCGACGGCAAGATCAAGAAGG
AGGAGACCGAAGAGGCCGAAGATGTGTACAAATGGTGGGAGAATGACAACCAGGACGATT
CCATCAAGTGGGAGACTCTAGAGCACAAGGGAGTCATGTTTCCTCCTGAATACGAACCAT
TGCCCAAAAGTGTGCTCATGAAGTACGACGGAACTCCTGTGGTGCTCCCCCATGCTGCTG
AGGAGGTTGCAGGCTTCTTTGGAGCCATGCTGGAAACCGACCACGCCAAGAACCCGACTT
TCCAGAAGAACTTCTTCAACGACTTCAAGGCGGTTCTCAAGGAGAGCGGGGGCGCTAAGG
ACAAGGATGGTAACAATGTGCAAATCAAAGCCTTTTCCAAGTGCGACTTTTCCGACATGT
ACGCTCACTTTGAAAAGATGCGGGAGGAGAAGAAAGCCATGAGCGCCGCGGAGAAGAAGG
CAATCAAGGCCGAGCGAGACAAGATCGAGGAGCCCTTCAAAGTGTGTCTGCTCAACGGCC
GAAAGGAACAGGTTGGCAACTTCCGAATCGAGCCTCCGGGTCTATTCCGTGGCCGAGGAG
CCCACCCCAAGACTGGTAAGCTCAAGCGTCGAGTCATGCCCGAGCAAATCACCATCAACA
TTGGCAAGGGCGTTCCTGTGCCCGAGCCTCCTGCTGGACACAAGTGGGGGGAGGTGCGAC
ACGACAATTCGGTTGCATGGCTTGCCATGTGGCACGAGAACATCAACAACTCCATCAAGT
ATGTCTTGTTTGCTGCAAATTCGTCTCTCAAGGGAATGTCCGACTACAAGAAGTTTGAGA
AAGCCCGAGAGCTCAAGAAACACGTCGCTACCATCCGAAAGGACTACGAGAAGGAGCTCA
AATCAGAGGCCATGTTTGAACGTCAGAGAGCCACAGCCATGTACCTGATTGATGTGTTGG
CACTGCGAGCTGGAGGAGAGAAGGGAGACGATGAGGCCGACACTGTGGGTTGTTGTTCTC
TTCGATACGAACACATTACTCTCTCTCCGCCAAACATCGTGGAGTTTGATTTCCTCGGTA
AGGACTCCATTCGGTACCACCAGGAGGTCGAAGTGTCTCCTCAAGTGTTCAAGAACCTGC
GCATCTTCAAGAAGGCCCCCAAGAAGGTTGGAGATGATATCTTTGACCGTCTGGACCCTT
CTGTGCTTAATAAGCATCTGCAGAACTACATGCCTGGTCTCACCGCCAAGGTTTTCCGAA
CCTACAACGCTTCCAAGACCATGGATGACCAGCTGGCTCTCATTCCCAACGAGGGAACTG
TCGCTGAGAAGCTCGTCAAGTTCAATGCTGCCAACCGAGCCGTTGCCATTCTGTGTAACC
ATCAAAAGACCGTGTCCAAGACGCACGGCGAGTCGGTTGGCAAGATTGAAGACCGAATCA
ACGAGGTGGTGTGGCAAAAGTGGCGTCACAAGCGAATGTTGCTAGATCTCGAACCAAAGC
TGCTCAAGAAGGAGCCCAAGCTGTTTGAGGATCTCGACGAGCTGTCCAAGGAGGAGAAGA
CTGCTTGTGCCAATCGACTTCTTGAGAAGGACTCGGAGCGATGGACAAAGAAGTTTGAGC
GGGACAACGAGAAGCTGGTGGCCGAGAAACAAAAGCCCAAGCCCAAGTCCGAGCTCAACG
CCAAGCTCAAGGACCTCGCCGACACTAACAAGCAGTATCTCAAGGAGATCAAATCCAACA
AGGTCGAGGGTAAGGGAACTGTGGAGAAGCTACGTGCCCAGGTAGAGAAGCTGGAGACCC
GGGTAACCACGATGCGAATGCAGCTCAAGGACAAGGAAGACAACTCGTCTGTGGCGCTGG
GCACCTCGAAAATGAACTATATTGATCCTAGATTGACAGTCAAGTTCAGCAAAAAGTACG
ACGTGCCCATTGAGAAGCTCTTCACCAAGACCCTACGGGACAAGTTCCAGTGGGCCATTC
AGAGTGCGGACGAGGACTGGGAGTTCTAGCTGTATGTATGTTATAGATAAGTTATTGTAG
ATTACGAAAGAACGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D26103g_CDS-001

Protein length: 761 aa.
Product: Topoisomerase, putative

>YALI0D26103g_CDS-001 MPARIITSDDEDDLMPPSRPSTVKRVKDEDDDDAPVVKKVKKESSTPKASPKVKKATTTT
KVKKESTTNAKKAPVKKTTTTTIKKDPVKQQTVKKTTIKKETVGADGKIKKEETEEAEDV
YKWWENDNQDDSIKWETLEHKGVMFPPEYEPLPKSVLMKYDGTPVVLPHAAEEVAGFFGA
MLETDHAKNPTFQKNFFNDFKAVLKESGGAKDKDGNNVQIKAFSKCDFSDMYAHFEKMRE
EKKAMSAAEKKAIKAERDKIEEPFKVCLLNGRKEQVGNFRIEPPGLFRGRGAHPKTGKLK
RRVMPEQITINIGKGVPVPEPPAGHKWGEVRHDNSVAWLAMWHENINNSIKYVLFAANSS
LKGMSDYKKFEKARELKKHVATIRKDYEKELKSEAMFERQRATAMYLIDVLALRAGGEKG
DDEADTVGCCSLRYEHITLSPPNIVEFDFLGKDSIRYHQEVEVSPQVFKNLRIFKKAPKK
VGDDIFDRLDPSVLNKHLQNYMPGLTAKVFRTYNASKTMDDQLALIPNEGTVAEKLVKFN
AANRAVAILCNHQKTVSKTHGESVGKIEDRINEVVWQKWRHKRMLLDLEPKLLKKEPKLF
EDLDELSKEEKTACANRLLEKDSERWTKKFERDNEKLVAEKQKPKPKSELNAKLKDLADT
NKQYLKEIKSNKVEGKGTVEKLRAQVEKLETRVTTMRMQLKDKEDNSSVALGTSKMNYID
PRLTVKFSKKYDVPIEKLFTKTLRDKFQWAIQSADEDWEF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG