YALI0D25454g

Overview

Description weakly similar to uniprot|P25625 Saccharomyces cerevisiae YCR044c PER1 involved in manganese homeostasis
Locus type CDS
Locus tag YALI0D25454g

Location

Species Yarrowia lipolytica Positions 3391654..3392878
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1225 (nuc.)
Previous locus YALI0D25431t Next locus YALI0D25465t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25454g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25454gYALI0D25454g_mRNA-001YALI0D25454g_CDS-001

Nucleotide sequence

 

>YALI0D25454g
ATGAGGTTCTACGTCATCCTAGTTCTTCTGACCACTCTCGTACTTGCCTCTGTTGGCGAC
AGATCGCCCGACTTCCGCAACTGCGTCACCAATTGCATTCGACACACGTGTCAGACACAA
AAATACGTGCCGCCGCTGATGCACCGGCTTCTGCTGTGGGACTGCCCTCAGGAATGCGAT
TATCGGTGTCAGCAGATCATCACGTTTGCTCGGCTCAACCAGGGCCAGGAAATCGTTCAA
TTCCACGGGAAATGGCCGTTTTTTCGGTTTTTCGGAATCCAGGAGTTGGCGTCGGTGGTC
TTTTCTTTGGCCAACTTTGTGCCTCATTACCGAGGTTGGCTGATGCTCAAGCACCTCAAT
CAGCGAAAACCCAACCCGCTAATCCCCTACTACATTGGATTTGCGCTGGTGGGAATGAAC
TCATGGATCTGGAGCGCCGTGTTCCATACCCGCGATTTCCCCGTGACCGAGAAGCTCGAC
TACTTCTCGGCCGGTCTGTCTGTGCTCTACGGTTTCTTTTTTGCCACTGTCAGAATCTTC
CGACTCGATCGAGACTCCAGAGAAACCACCCGTCTCGTTCTCGCCTCAGTCTGTGTCACG
CTCTTCCTGGCTCACGTTTCGTATCTTTCCTTCATCAAATTCGACTACGGATACAACATG
ACGGCTAACGTAGTGGTAGGAGCCCTCCAGCTCATCATGTGGAGTGTTTACTCGTTCACC
CAGTTTGCAAAGACACACCAATGGTGGTCGCTCATGCCATTTGGACTCTGTGTCACCATT
TCGGCTGCTATGGGCCTGGAACTGTTTGATTTCCCACCATGGAAATTTTTCATCGACGCT
CATTCGCTGTGGCACGCTGCTACCGTGATTCCCTGTTTCCTGTGGTACACATGGATGAAG
AAGGATCTTCAGTACGAGGAGCGAGCAGAGAAACAGGAGTGAGGGTACAAGAGGGTTTAG
CCGGTCAACCGGTGCAAGTGGTTCGATGGACAAGGACAAGGTCTAATTGATAACCCGGTG
CATGAAGTCCAGCCGGTACTGCCTGGAGATGAGAGGATGTAAATATTGGAGTCAAGTAGT
AACTCTGCTACTATACAACACCTGTAACATCAGCCCATCGCCGTTTGCTGAAATAGCTAG
AAGAGGAAGAAGTAGAATCATTTGTATTTCTGCGAGCCTCCAATATGCTCCGGTTCCCTC
AAATATATGTCAATTATAGATACCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25454g_CDS-001

Protein length: 314 aa.
Product: Conserved hypothetical protein

>YALI0D25454g_CDS-001 MRFYVILVLLTTLVLASVGDRSPDFRNCVTNCIRHTCQTQKYVPPLMHRLLLWDCPQECD
YRCQQIITFARLNQGQEIVQFHGKWPFFRFFGIQELASVVFSLANFVPHYRGWLMLKHLN
QRKPNPLIPYYIGFALVGMNSWIWSAVFHTRDFPVTEKLDYFSAGLSVLYGFFFATVRIF
RLDRDSRETTRLVLASVCVTLFLAHVSYLSFIKFDYGYNMTANVVVGALQLIMWSVYSFT
QFAKTHQWWSLMPFGLCVTISAAMGLELFDFPPWKFFIDAHSLWHAATVIPCFLWYTWMK
KDLQYEERAEKQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG