YALI0D25388g

Overview

Description similar to uniprot|P53104 Saccharomyces cerevisiae YGL180w serine/threonine-protein kinase APG1 essential for autophagocytosis
Locus type CDS
Locus tag YALI0D25388g

Location

Species Yarrowia lipolytica Positions 3385288..3387584
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2297 (nuc.)
Previous locus YALI0D25366g Next locus YALI0D25410t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25388g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25388gYALI0D25388g_mRNA-001YALI0D25388g_CDS-001

Nucleotide sequence

 

>YALI0D25388g
ATGTCCAGCATCAAATCATACACTATTGGCAACGAGCTAGGCCGCGGCTCGTTCGCCACC
GTCTACAAAGGCGAGCACGTGGCCAGCGGCTCTCCGGTGGCCATCAAGTCCGTTCTCCGG
GCTAAGCTCAACCGCAAGTTGTTGGAAAACCTGGGCTCGGAAATCAGCATTTTGAAGCAG
ATGAAGCACCCCCACGTGGTGGAACTGCTCGACTTCCAGGAGACCCCCACGCATTTCCAC
CTAGTGATGGAGTACTGCTCTCTGGGCGACCTCAGTTTCTTTCTCAAGAAAAAGAAGGAG
CTGTCGGAAACGTTGCCGCTAGTGGCGTCCTTGTTGAGACGGTATCCATCCAACACCAGA
GGGCTCCATGAGGAGCTGGTTCGGCACTTCGTTCATCAGCTTTCAGCGGCCCTGGAGTTT
CTGCGACAAAAGAACCTCGTTCATCGAGACATCAAGCCCCAGAATCTGCTTTTATGCCCG
CCCTCGCTTTCCGAAATGGATGCCCAAAACGCCAATCTCTACGGACGATGGGAGCTGCCG
ATTCTCAAGATTGCCGACTTTGGATTTGCGCGCATTTTGCCGGCGTCGGCGTTGGCGGAG
ACCCTCTGCGGTTCCCCCCTCTACATGGCTCCGGAGATTTTGCGCTACGAAAAGTACAAT
GCCAAGGCCGATTTGTGGTCGGTTGGAGCCGTCACCTATGAGATGGTGGTTGGCAAGCCG
CCGTTCAAGGCCAATAACTACGTGGAACTCTTGAAGACAATCGAGCAGTCCAACGACGTG
ATCGGATTTGGCCGAGAACCGCCCTCGGAAGACATGCAAGATTTCGTGCGATGTTTGCTC
AAGAAGAATCCCGCCGATAGAATCGGCTTCAAGGAGTACTTTGAACATCCCATTATTGCC
AACAAGCAGGTTATTGGCTCCGGGGAGGAATTGGACCGATCTCAGCTGGATCCCAGAATG
TACATTTCCGAGTACATTCAGGAGGCCGATCTTCCTAAGTTGGATCTGGACAGGGAGATG
GACAGCTTCAGCCAGAAGCGGTCAACTCAGAAATCCTCCCCCAAAAACTCCACTAATAAG
ACACTGTCTTCTACCGTGAAGAACCCTCTCTTGGAACTCACCTCCCCCTCTCCCGGATCT
TCTCTTCTACTCACGCGCAAAAACGAGTCACTCTTCCTTGAAAGTGAATACGTTGTCGTG
GAGAAGAGGCAGGTTGAAGTCAACACTTTGGCCGATGAGCTGGCACGCGAGCCAGACGAG
AGACGTCCCAGTTCCGAGCGGCGCTTCTCATTGACTTACGGAGCCCCCACTGGAGCCATG
GCTCGAGCCTTATCTATGGCGTCCGCCAGACTTTTGGGAGAGAAGAAGAACGGTGCTGGA
CACGGTTCTGGAAATGGTTCTAGAAATGGTTCTGGAAATGGTTCCGGAAACGGCGCCAGG
CTGTCAGCAGGGGCAGCTCTTTCTGGAACTAGTTCTGGAACCTCTACGACCGGCAAATCG
CCTCCTGTTCCTGCCACAACAACCCCATCTCTGTCGGAGCGCGAGATTGTCGAAACTCTC
GAGGAAATCGCAGCCAAAGCCCGCTCAATTGCTCTCCTGGCAGATGTCAAGTATTCACAG
ATCCAGGACGACGTGGACAACCCAGACATGAATCTGCCTGACTCCGTCTCTTCCTCCATT
GCAGAAGAAGCCATGCTCTTGTACGTCAAGACACTGTCTCTGCTGTCGCTCGCTATGGAT
CAAGCCGGAGCCTGGTGGTCCAATAACCACAAAGACAACAAGATGGTGTCTTCCCACTTC
AATGAAATCATTCAGTGGACCCGAAGCGCTTTCAACGAGTCACTGGAGCGGGCCGAAACG
GTGAAAAAGAAGGTCTCCTCAGGAACTACACACACCACGGCCGAAAAGTTGATTTTCGAC
CGCGCCCTGGAAATGTCACGGGACGCAGCTGTTCAGGAGATCTCCGGCGACTTCACTGGC
TGCGAGTCGGCCTACACCACGTCCATTTGGATGCTGGAGGCGCTTCTGGAGGATGACGAA
GATGGACTTGGCGAGGAGGATCGCAGAATTGTGGAGCGGTTCATTAGTAGTATTACTAAA
CGGTTGGTGATACTGAGGGGTCAGCAGGAGTAATTAGTTCTATGTGGGGGCTGTGAAGAC
ATTGGTAGCAGTGACGTCAGTGGTGACAGAGACGACAATGGTAGCAGCGCCGACAGTGGT
AGCAACAGCGCCGGCAACGGCAACACGACAAACTAACATAGGTATATTTATAGTGACTAA
CAGATTTGAGTTGACAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25388g_CDS-001

Protein length: 711 aa.
Product: Protein serine/threonine kinase, putative

>YALI0D25388g_CDS-001 MSSIKSYTIGNELGRGSFATVYKGEHVASGSPVAIKSVLRAKLNRKLLENLGSEISILKQ
MKHPHVVELLDFQETPTHFHLVMEYCSLGDLSFFLKKKKELSETLPLVASLLRRYPSNTR
GLHEELVRHFVHQLSAALEFLRQKNLVHRDIKPQNLLLCPPSLSEMDAQNANLYGRWELP
ILKIADFGFARILPASALAETLCGSPLYMAPEILRYEKYNAKADLWSVGAVTYEMVVGKP
PFKANNYVELLKTIEQSNDVIGFGREPPSEDMQDFVRCLLKKNPADRIGFKEYFEHPIIA
NKQVIGSGEELDRSQLDPRMYISEYIQEADLPKLDLDREMDSFSQKRSTQKSSPKNSTNK
TLSSTVKNPLLELTSPSPGSSLLLTRKNESLFLESEYVVVEKRQVEVNTLADELAREPDE
RRPSSERRFSLTYGAPTGAMARALSMASARLLGEKKNGAGHGSGNGSRNGSGNGSGNGAR
LSAGAALSGTSSGTSTTGKSPPVPATTTPSLSEREIVETLEEIAAKARSIALLADVKYSQ
IQDDVDNPDMNLPDSVSSSIAEEAMLLYVKTLSLLSLAMDQAGAWWSNNHKDNKMVSSHF
NEIIQWTRSAFNESLERAETVKKKVSSGTTHTTAEKLIFDRALEMSRDAAVQEISGDFTG
CESAYTTSIWMLEALLEDDEDGLGEEDRRIVERFISSITKRLVILRGQQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG