YALI0D25234g

Overview

Description weakly similar to uniprot|P48567 Saccharomyces cerevisiae YNL292w EXM1
Locus type CDS
Locus tag YALI0D25234g

Location

Species Yarrowia lipolytica Positions 3362877..3364421
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1545 (nuc.)
Previous locus YALI0D25212g Next locus YALI0D25256g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25234g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25234gYALI0D25234g_mRNA-001YALI0D25234g_CDS-001

Nucleotide sequence

 

>YALI0D25234g
ATGCTCAAGTACAACGGAGTGTTTGTCGTCGACAAACCCAAGAATATTGGGTCTACACAG
GTGGTGGAGAAACTCAAGTGGACCTTCATCAATGCCGCCGGAGGAAAGCAGAAGGGGGGC
AGCCGAAACCCGCTGAAAATCGGCCACGGGGGAGCTCTAGACCCGTTTGCCACGGGCGTT
CTGGCGATTGGGGTCGGAGCCGGAACCAAACAGCTCGGCGACATGACCCACAGCACTGAC
AAGGAGTACATTGCGACGGTGTTTATGGGCCACGAAACCACCACCTGCGACCGTGAGGGC
CATGTGGTCAAGTCTGACGATTCGAGCCATATTACCGCGGAGAAGATCGAGGAGACTCTG
GCAAAGTTCCGTGGCGACATCAAGCAGTTCCCACCGGTTTACTCGTCCGTCAGCGTCGAC
GGAGTGCGGCTTTGGGACTATGCTCGCAACGGACTCAAGGTGCCGTACATTCCGTCTCGG
GAGTGCCACGTGAGCAAGCTGGAGCTGGTGTCGCCGGTGATTTCGACCCACGGATACACT
CCTCTGGGGCGGGCCAACGAGGAGGAGATGGCTGTGGCCGCCGGAGTGGCCAAGATCAAA
AAGGAGGGGGGAGACATGACTCGAGAAGAGTACGAAAAGAGCAAGCAAGGCCAGCCGACG
GTGTCGAAAAAGCAGCTCAAGAAGAACAAGAAGCGTAAATATGACGCCGAGGAAGTCGCC
GCCGTCGTCAGAGACCCCGTTGGTGAAGTTGAGGAGACCCACACCCACTCCAAGTCGCTG
GAGGAGCGCGAAAAAGAATACAATGAGAAACTGGCCCAGCAGGAGGTGAATGTTTTCAAC
AAGTTTGCCAAGGAGCAGGCCGAGAAGGGCTCTTTCCAACCCAAGACGCCGGTCTTCCAG
ATCCGAGCTGCGGTGTCTTCGGGAACGTATATCCGACAGCTGGCCAATGATATCTGCGAA
GAGCTGGGCGTCTCGGGACATTTGGTGGAGTTGCGACGATTGACCCAAGGCGACTTTGGA
GTGGACAATTGTTTTCCTCTGGACAAGATTCTGAACCAGCCGGAGGAGATCTGGGAACAC
GAGATCACCAAGGCGCTGAAAGAGGGACCCAAGTATGTTTACACCGAGTCGGGAGTGGCA
GGGGTGGTGGAGGAGAAGGGCGGCGATAGACGAATTACTGAGACGGAGACAGAGGCTCAG
ACGGAGACCGGGACTGAGACCGGGTCTGAAGCTCAGACTGAGCCCAAAGCCCAGTCAGTG
GATGATAAGACCTCTGACAAGAATGAGACTGCCAACAAGACGGTTGTCGAAGCCGGAGCC
GAATCCAAGAAACAAAAGACTGAGTAGTTTCAACACTGGACTGCAATATTCTCTGTAAAA
AGTTTGCCATACATACTATAGTACTATAGAACGATCAATGATTTTGGACCTCTTTGGAAG
GATTGTAGAGCAACAGTGAGCGATTTCGTAACCCCAGAGGTTTGACAACTATCTGACCCA
TATAGATCATGTCTACAAGTAGAAGAACTGTACCACTGATTCCAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25234g_CDS-001

Protein length: 449 aa.
Product: Conserved hypothetical protein

>YALI0D25234g_CDS-001 MLKYNGVFVVDKPKNIGSTQVVEKLKWTFINAAGGKQKGGSRNPLKIGHGGALDPFATGV
LAIGVGAGTKQLGDMTHSTDKEYIATVFMGHETTTCDREGHVVKSDDSSHITAEKIEETL
AKFRGDIKQFPPVYSSVSVDGVRLWDYARNGLKVPYIPSRECHVSKLELVSPVISTHGYT
PLGRANEEEMAVAAGVAKIKKEGGDMTREEYEKSKQGQPTVSKKQLKKNKKRKYDAEEVA
AVVRDPVGEVEETHTHSKSLEEREKEYNEKLAQQEVNVFNKFAKEQAEKGSFQPKTPVFQ
IRAAVSSGTYIRQLANDICEELGVSGHLVELRRLTQGDFGVDNCFPLDKILNQPEEIWEH
EITKALKEGPKYVYTESGVAGVVEEKGGDRRITETETEAQTETGTETGSEAQTEPKAQSV
DDKTSDKNETANKTVVEAGAESKKQKTE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG