YALI0D25014g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D25014g

Location

Species Yarrowia lipolytica Positions 3333131..3334741
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1611 (nuc.)
Previous locus YALI0D24992g Next locus YALI0D25036g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D25014g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D25014gYALI0D25014g_mRNA-001YALI0D25014g_CDS-001

Nucleotide sequence

 

>YALI0D25014g
ATGCACCTGTCCACCTCCGTTCTCGGTGCCCTGTTGGCTCTGGGCCACGCCCTGCCTTTT
GATACCTCCAGTGTCGCTGCCACCGACGCCTTTGCTGCCACCAACGCCACGGCCCTCGCG
GCCAACGGCACTCTCACCAATGGCACCTTCAGCAACCACACTGCCCCCTCCGCAACCTCC
CAGCTTGCCTCACTCACTCAGCTGACCAGTGATACCCCCGGCGAAGCCACCAGTGCCGCC
GTTTCTGCCGCCGCAGCAGACTTTGCCGCAGCCGCCGTGACCGTGACCGTGACCGCCCCC
GCCAACACCGTCACCGTCACCGAGACTCCTGCTCCCCAGACCGTGACCGTGTCCGTCTCC
TACTGTCCCACCCCCGCGCCTACTGGTGAGGCTGCCGCCGGTGCTTCCGACAACACCGCC
GCCGCCGCAGCTGGAACCCCCTCCAACAAGCAGGCCGGCCAGAACTTCAACGCCAACGAG
GACGCCGCTGGCGCCAACTCTGGCTCGGAGCCCGCCGGCGCCTCCGATTCCTCCGACGAA
GAAAACACAACTGTCTTCCTCACCCAGACCAAGTTCCTGACCAAGACCCTCTCCCAGTAC
GGAGTCACCACCACCGTTCCCACCGCCACCGTCACCTCTGCTATTGTCACCAAGGCCAAT
GAGGAGAACGCCGCCGCCGCCTCCCCCATTGTGACTGACATCACCGAGACCCTGACCGAG
GTCGAGACCGTTGCCTCTGAGGAACCTCAGGGAACGTCTACTCGAACTCATTACATCACC
AAGACCAACACCATTACCCGGGTGAGATCGTCCACTGCCCAGCCCGAGACTTCCACCGAA
GCTCCTGAGGCTGCTGCCGGAGCCTCCTCTTCCATCGAGACCTCCTCCGAGGCCTCCTCC
GAGGCCTCTGTGGAGGCCACCGCTTCGGTCGAGCCTTCCAACACGTCATCCGAGGTTGCC
GCCGAGGCCCCCACCTCCGCTCCCCACAACGCAACCTTCAATGCTACTCAGGCTCCCGTT
GAGACCTCCTCCACCCCCGTGCTGTCGACCACTTCTCTTGTGGCCCCCACCAACGCCACC
GAAGCCGGAGCCGCTGCTCCCCTCACCTCTTCTTCCGAGCCCGAGGGAACCTCCACCACC
TACGTTTCCTCCACCGTGGTCGCTACTCTGGCGCCCAAGACCTCGTCTATCCCCGAGGGC
GCTGCCGGAGCCGAGTCTTCCGGAGTGTCTTCTGAGGCCTCTTCTGAGCTCCCCTCTTCA
GTTGCTTCTTCCTCGGCTCCTGCTTCCACCACCGCTCCCGAAGGCGCTCCTGAAGGAGCT
GCTGCCGTCTCTTCTACCGCGGAGGCCTCTGCTGAGGCTTCTTCCCCGGCTCCTTCCTCT
GCCCCTGTCTCTGCTGAGGCCGGAGAGTCTGCCGTTCCCCTTTCCGAATCGGCTCCCATC
CCCTCCCCTGCCCCCACAGTTGCCCCCACCGGCTTTGCCGCTAACGGCACCTTCACCTCT
GCCTAACCGCAGCAAAAAGTGATCGAGCCGTGATGCTGGCGTTGCGGCTGTATTTATACG
ACTGGCCGTGTGACTAATGAATTGAGCGCAGCAATACAAGTTTAGTAGCGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D25014g_CDS-001

Protein length: 502 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D25014g_CDS-001 MHLSTSVLGALLALGHALPFDTSSVAATDAFAATNATALAANGTLTNGTFSNHTAPSATS
QLASLTQLTSDTPGEATSAAVSAAAADFAAAAVTVTVTAPANTVTVTETPAPQTVTVSVS
YCPTPAPTGEAAAGASDNTAAAAAGTPSNKQAGQNFNANEDAAGANSGSEPAGASDSSDE
ENTTVFLTQTKFLTKTLSQYGVTTTVPTATVTSAIVTKANEENAAAASPIVTDITETLTE
VETVASEEPQGTSTRTHYITKTNTITRVRSSTAQPETSTEAPEAAAGASSSIETSSEASS
EASVEATASVEPSNTSSEVAAEAPTSAPHNATFNATQAPVETSSTPVLSTTSLVAPTNAT
EAGAAAPLTSSSEPEGTSTTYVSSTVVATLAPKTSSIPEGAAGAESSGVSSEASSELPSS
VASSSAPASTTAPEGAPEGAAAVSSTAEASAEASSPAPSSAPVSAEAGESAVPLSESAPI
PSPAPTVAPTGFAANGTFTSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG