YALI0D24860g

Overview

Description weakly similar to uniprot|Q01652 Penicillium chrysogenum PHOG related to acid phosphatase
Locus type CDS
Locus tag YALI0D24860g

Location

Species Yarrowia lipolytica Positions 3310713..3312303
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1591 (nuc.)
Previous locus YALI0D24841r Next locus YALI0D24904t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24860g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24860gYALI0D24860g_mRNA-001YALI0D24860g_CDS-001

Nucleotide sequence

 

>YALI0D24860g
ATGACATCACCACATTTTGATGACTCCGGCTTTGCAGCTCTGCAACAAGCCAACAACCTG
CGGTTTCTGTCGCCGTCCTCACGCGACTGGATCGAGCCCCATGACGAATCCTCCACCGCC
CCTCTGTACGACGCTCCTCACGTCGAGGACTTTCTGCATTACCCCGTCAACCCCGTCCAG
CAGGGCCAGGTCTACTCCTACTCACTCCTGGAAGACTACCTTCACCTGGGCGGTCCGGCC
ACGGGCTTCCCCAACGCCGCCGCCGCCGCCGCTGCTGCTGCTCACAACGCCCATGTCGCA
CATACCGCCGCCGCTGCTGCAGCAACAGCAACTCACCCAGGGGCTCACCAGAACGCCCAT
GTCGCTGCTCACCCAGCACACCCCCATAACGCGGGGGCGATCGGACCAGGCGGAACTTAT
CCTCCCACCCACCAATCGCCAACCACGGTGCCGTCACCATCGACCCCCATCCACAAGGTG
CCGCTCATCTACGATCCGTCGCCCAACCCGTCGGCGGCAGAATCAGCGTCCTATCTGGAG
TTTGCTACCTCCACCCAGCATGCCAACGTCTTTGACTACAACGGCGACGTGGCCAAAATG
AGCATCCGGGCCAAACTGGGCGGCACCTTCTTTCTGTCGCAGTCGTCAGCCGCAGACACA
GACCCCGACGCCTACCACCTCACCTTCTACCGGCGCAACCTGCTGCAGGTGAGAGCATCG
GTCCACAACGATCACAAGGTTGTCTACGTGCAGACCGAGTCTGGCGAGCGTGCAAAGACC
CAGAGCCTGTGGCTGGACGTGGAGGTGACGGACAACTCGGCCGACTCGGATCCCCAGCGG
CTGCTGTTCTGCTCGCCCAAGTCCGCTACCTCGTTGCCGGCCGACGACGAAGCCAAGGCG
AAAATGGTCTTCCCCGACAACCCCACCGCCAACGACGAGGTGGAGTGGAAGCGGCTGCAG
TTCAAGGGCGCCACCGCCCACAATGGCCGCACCAAGCACCAACAGTTTTTCTACGTCTCG
GTCAAGTGTCTGGCTGAGCTGGAGAACGGCACCAAGACGTGTCTGGCGTCGGCGCTGTCC
CGTCCCGTGGTTGTGCGCGGCCGCAACCCCCGGTTCTACCTCAACCGAAACTGCATCATT
TTGAACGATGGCTCGTCGAGGCAGGCGGATTCGGGCGACTCCAACTCCACCACCACCATG
ACCACACAGACCTCGGCCACCAACAAGAAGCGGTCGGCGTCAGACTCGGATTACTCGTCG
AAAAAGCGCATTCTTCCCGACACATCGGAAATGAGCTCGCCGAACAGCGACACGTCGAGG
CCCCACACCATTTACTCCAAGGAAGAGGACTACGAGTATTTTCCCGTGCCGCTGAATTAC
TGGTTGCCGCCAGTCGAAGTGGTGTACCGGCCGCATGCGGTTCATCATTCTGTTGGCAAC
GGGGCTGGCCAGGAGGCGCGAAAGTATTTCTCCAAGATTGAGTAGGGCTGGAGATGTACA
AGACAAGAATGACAACAGCAACATCAGATAAACTAACATCGCGAGGCATAAATAGCGACC
TAAACAGTAAAATAAACGTGTATATTTAGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24860g_CDS-001

Protein length: 495 aa.
Product: Conserved hypothetical protein

>YALI0D24860g_CDS-001 MTSPHFDDSGFAALQQANNLRFLSPSSRDWIEPHDESSTAPLYDAPHVEDFLHYPVNPVQ
QGQVYSYSLLEDYLHLGGPATGFPNAAAAAAAAAHNAHVAHTAAAAAATATHPGAHQNAH
VAAHPAHPHNAGAIGPGGTYPPTHQSPTTVPSPSTPIHKVPLIYDPSPNPSAAESASYLE
FATSTQHANVFDYNGDVAKMSIRAKLGGTFFLSQSSAADTDPDAYHLTFYRRNLLQVRAS
VHNDHKVVYVQTESGERAKTQSLWLDVEVTDNSADSDPQRLLFCSPKSATSLPADDEAKA
KMVFPDNPTANDEVEWKRLQFKGATAHNGRTKHQQFFYVSVKCLAELENGTKTCLASALS
RPVVVRGRNPRFYLNRNCIILNDGSSRQADSGDSNSTTTMTTQTSATNKKRSASDSDYSS
KKRILPDTSEMSSPNSDTSRPHTIYSKEEDYEYFPVPLNYWLPPVEVVYRPHAVHHSVGN
GAGQEARKYFSKIE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG