YALI0D24772g

Overview

Description weakly similar to uniprot|P46996 Saccharomyces cerevisiae YJL163C Putative protein of unknown function
Locus type CDS
Locus tag YALI0D24772g

Location

Species Yarrowia lipolytica Positions 3295633..3297240
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1608 (nuc.)
Previous locus YALI0D24750g Next locus YALI0D24794t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24772g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24772gYALI0D24772g_mRNA-001YALI0D24772g_CDS-001

Nucleotide sequence

 

>YALI0D24772g
ATGAGCGTGCCGGATCCGACCAATGCGCTGGAAACCACGCCACTGAACCCGTTCCACAAT
CCCTGGAGAGAACAGTCGCCATGGCGGATCATCCGACCGCTCTCTGTGGCGTTTCTGGCG
ACCGCGATAGCCGGGGTTATCGGCCCCAATTTTCTGCTGGCGACTCTGTGCAAACACTAC
TACGACGGGCGGGAGGGCCTTGACCCGGATTCCCTCACCATTTCCAACCCGCTGTGCCAA
ATATCGCACCTTCAAGTGCAGGCGGGCACCAACCAGAGCAGACTCAATCTGTGCCGAAAT
GTGGTTGCTCTGATAGTTTTCCCGCGGCTGAGTGCGTGGAGTGACCGTCGGGGACGCAAG
CCGATCCTCAAAATTGCCGCCGGATTCACCCTGGTATCGCTGACCCTACAATGGTGCGTG
CAGCATTTTTGGAGGTGGTTCCCTGTACCCACCTTTATTCTCGCCGGTTGTCTGGACCTG
TCGGCGGTGGTGTTTCAGCTGGGAGTCCTGGCCATTGCAGATTCCACTTGTAGACGCACA
GTCAATACGTCGTATCTGTTTGTGGCCTCCTATCTCTTCACAGCTCTGGGTTCTTACGTA
GGCTCCGAGCTGGCTAAAAGAGGCCTCTCCACCCTCGCAGCCGTTTACGTGCCGCTGTAC
CTAGTCTTTTTCATCTGGACGTGGTTTGTTTCCGAGACCTTGCCCTACTCGGAACGAGAC
AAGGCCACAGAAGTGCACAACGAAAAGACAGACTCCAGAAGAAAGACGCTGCTGTACTAC
GGCAACCCGCTGCAACCGCTGGCGGCTCTTCTGAGCCCGGCGCATCGCCGCATCAAGATC
GCCATGGTCATTTTCGCAGCTGCTTGTGCTCTGGAAGACACTTTTTACCAGACATCGCAG
TACGTGACTCTGCTCTACATCGAGTACAGATTCAAGTGGACCAGCATCCAGCTGGGCAAG
ATGCAGGCCGCGTCGGCAGCCGTGTCGCTGGTCATGGTCTGTATTGCTCCCTTCATTCTC
CGAGAGCTGGAAAAGCGAAGAAACCCCGTCACCCAAGATATCCACGTGCTGAGAACCGCG
GCATTCTGGACCGCCTCTCTGGCGACCATCAAGGCGCTGGCGGGCTCAGTGGCTCCGTTT
GTCGTTGCCCACGTGCTTCTGGGACTCAGAGCCGTCGCCGATTCGCCCCACAAGTCCGTA
GCCATGGCCCTGGCGCCCTCGGCGGCCGCAGGACAGGTTTTGGGGGCTTTGGAGATGGCC
GTGACACTGGTGAAGATTCCCGCCAGCACTGTTTTGGTCCGCATGTACTCCTGGACGGTG
TACACCAACCCTGCTGCGGTTCTCTGGATCATTTGTTTCGGAGAGTGGATTGCTTTTGCC
TTCTTTTTGGCCCTGTGGGTGTAACATGGCAGCTTTTGTATATATTTTATTGATTAAATG
AGGTTGGTCCTGGTAAAGTGTTAATTGGACGTTCGAGTTTGTTCACACTCGATTCAGCTT
CCATTCAGGCACTATGAAGCTCTTCAAAACGGTCTCGACTAGGATGCTGTAAAAACTGCC
TAGATCCAACTAAAAAGTCAAGTAGAGTATTGGATGGTATTTTTTTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24772g_CDS-001

Protein length: 468 aa.
Product: Conserved hypothetical protein

>YALI0D24772g_CDS-001 MSVPDPTNALETTPLNPFHNPWREQSPWRIIRPLSVAFLATAIAGVIGPNFLLATLCKHY
YDGREGLDPDSLTISNPLCQISHLQVQAGTNQSRLNLCRNVVALIVFPRLSAWSDRRGRK
PILKIAAGFTLVSLTLQWCVQHFWRWFPVPTFILAGCLDLSAVVFQLGVLAIADSTCRRT
VNTSYLFVASYLFTALGSYVGSELAKRGLSTLAAVYVPLYLVFFIWTWFVSETLPYSERD
KATEVHNEKTDSRRKTLLYYGNPLQPLAALLSPAHRRIKIAMVIFAAACALEDTFYQTSQ
YVTLLYIEYRFKWTSIQLGKMQAASAAVSLVMVCIAPFILRELEKRRNPVTQDIHVLRTA
AFWTASLATIKALAGSVAPFVVAHVLLGLRAVADSPHKSVAMALAPSAAAGQVLGALEMA
VTLVKIPASTVLVRMYSWTVYTNPAAVLWIICFGEWIAFAFFLALWV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG