YALI0D24541g

Overview

Description weakly similar to uniprot|P40564 Saccharomyces cerevisiae YIR004w DJP1 DnaJ-like
Locus type CDS
Locus tag YALI0D24541g

Location

Species Yarrowia lipolytica Positions 3262918..3264420
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1503 (nuc.)
Previous locus YALI0D24519g Next locus YALI0D24552g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24541g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24541gYALI0D24541g_mRNA-001YALI0D24541g_CDS-001

Nucleotide sequence

 

>YALI0D24541g
ATGCCCAAACTGATTCTATACCAGGTTCTGGACGTCCAGGAGGACGCTACGATTGGTCAG
ATCGAGCAGGCGTATCGCACGCGGTCTCTGCAGTTTCTGACGACTCTTTTGGGCAACAAT
TACGACTACTTTTACTCGGTTTCGGACGCCTTTCAGATTCTGCGTAAACACCGCGAGTTC
TATGAGACGAGCGGCGACTCGCCCGAGTTTTTTGCGCGCGTCGGGCCCGAGCTCCAGGAT
GCGGTGGATTTCTTCGTGCAGTGTTTTGGCGTACCGCAGCTGGAGATCTTCACCGGCCCG
GTGCCGATTCTGTACTGGATCCAGGAGCTGCGGCGGTCCTTCCCGTTCACAGACACGTAC
AATCACATTACCACGGAAGGAATCACGGACAAGACGATGGAGTTGATGCGGCGCAACGCG
TGGCAGGGAAACGAGACGCTGCAGAAGGAAAAGAACCGGTCACACGAGTTTGATATCACG
GGCGCCATCAACGTGCAAGATGCGGCGCAGCTGATTGTCCAGCAGCTGTTGGACGTGGAT
CTGGAAGGAGACGACAACATCAAGCTGCAAAAGGCAGGCAAATTGGAGCAGGAAACCGGG
GTCTTCCCCACCGAGGGCTTCTCCCCACAGTTCACCGACTCCATTGTGAAGAAGCTGAAG
CCGTATTTCCGCATTCCGTTTGCCGTGGACGTTCTCAAGGCTCTGGGAACAATTTTCATG
GTCCGTGCGGAAGGCTACGCCGCCAAGTACCGGGGCAAGCTGTTTTCGTCGGTGGTGTCC
AACAAATCAGCCAACAATGCCTCTTCGTTGATTGAGAAGATTGTGTGGTCGAAAAACCGA
CTCCACGCCATCTCCAAGTACTTCAAGCAGATTGGAGGGTCCATCGACGACCAGGTCAAC
ATCATCTACACCGAGTTTTTCTACCAGCTGGTGCGGGAGGTGTGTCTGGCAGCCAACTTG
ACGGTTTCGGAGATCTTTGAGGGCGAATGGGCCGCCAAGGAAGACAAGAAGGACAAGATG
GTTCGTGCATACCGCATTTGGGAGATTGGCAACTTTCTGTGCATCGAGGCGACCCGAACT
GCCGCCGAAAGAGGCATTTCCATCGAGCACAACCCTAACCTGCAACATGACGACGTGTTG
GCCGGAGCAATCTACCTCACAGCCTTCAACGAGGCACTGGTGCTGGCCAAGAAACGCAAT
CTCTCGAATATCGACTATTCCAACGGAAAGGCGGCCGCTCCTTTCCCTCAGGGAGCCAGC
TTTGATCCCTGGGCCGTGGGAGTCGTGTGGTCGCCATGGGACGTGGTGTCCGACTGCTCG
GGCTCGGGAGGAGTGGTCACCACGGAAGACGTGTTTACCGGCGACGAGGACAAGAGGTAT
GATGTGGAGGTGACTGCTCAGGGCGGTACTGATGCGGGTTAGCGAAACATCAGGAAACGG
GCTTGATGGGTTGTTAGTCTGTCGTCTCTTTGTACTTATATATGAATACAGTAATGATAA
TGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24541g_CDS-001

Protein length: 474 aa.
Product: Conserved hypothetical protein

>YALI0D24541g_CDS-001 MPKLILYQVLDVQEDATIGQIEQAYRTRSLQFLTTLLGNNYDYFYSVSDAFQILRKHREF
YETSGDSPEFFARVGPELQDAVDFFVQCFGVPQLEIFTGPVPILYWIQELRRSFPFTDTY
NHITTEGITDKTMELMRRNAWQGNETLQKEKNRSHEFDITGAINVQDAAQLIVQQLLDVD
LEGDDNIKLQKAGKLEQETGVFPTEGFSPQFTDSIVKKLKPYFRIPFAVDVLKALGTIFM
VRAEGYAAKYRGKLFSSVVSNKSANNASSLIEKIVWSKNRLHAISKYFKQIGGSIDDQVN
IIYTEFFYQLVREVCLAANLTVSEIFEGEWAAKEDKKDKMVRAYRIWEIGNFLCIEATRT
AAERGISIEHNPNLQHDDVLAGAIYLTAFNEALVLAKKRNLSNIDYSNGKAAAPFPQGAS
FDPWAVGVVWSPWDVVSDCSGSGGVVTTEDVFTGDEDKRYDVEVTAQGGTDAG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG