YALI0D24167g - CBF1

Overview

Description uniprot|Q6C7Z2 Yarrowia lipolytica YALI0D24167g CBF1 Basic helix-loop-helix (bHLH) protein
Locus type CDS
Gene name CBF1
Locus tag YALI0D24167g

Location

Species Yarrowia lipolytica Positions 3183316..3184516
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1201 (nuc.)
Previous locus YALI0D24145g Next locus YALI0D24189g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D24167g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D24167gYALI0D24167g_mRNA-001YALI0D24167g_CDS-001

Nucleotide sequence

 

>YALI0D24167g
ATGTCCGCCATCCGAAGAACTCGGTCAACCACCAGCGAGGACGAGGCCATCACCAAGCGC
CTCAAGCAGGAGGTGATGGTCTCCGAGGAGGCGATTGACGACAAGGACGAGCTCAACGAG
AGCGATGCGGCTGCCGCCGTGGCCGCCGTGGCCGCAGCTGTCCAGGAAAAGAAGGACCAC
GACGACAGTGTCAAGGCCGCGGACGTGCTGCGGCAGACGCTGGAGCACGTGAATGAGCAT
GTGACCGACGACGCACAGGGCCATGTGCCGCAGCAGCAGCAACATCAGCAGCAGGAGCAG
CAGGGCCACGTTCAGCAGCAGCAGGAGCAGCAGGGTCACGTGCAGCAGCAGGACCAACAG
AGCCACGTGCAGCAGGACACACAGAACCACGTGCAGCAGCAGCAGCAGGACCCGCAGAAC
CATGTGCAACAGCAGCAGCAGCAGCAGGGACTGGGCCAGCACGTGAGCCAGGACCAGGGC
CAAGGGCTTGACTCGCACGTGCACCACGGCATGACGGCTATCAACCAGCACGTGCCGCAG
CAGGCACACGTGACGCAGCCCTACGAGCTCGATCTCAACCCCTACAACCAGGCGCCCAAC
TCGGCCAAGCCGCCCGTGGGCTCCGAGCAGTGGCACCAGATGCGGCGCGACAACCACAAG
GAGGTGGAGCGGCGACGGCGCGAGACCATCAATGACGGCATCAACACGCTTGCGGAGCTC
ATTGCCACGAGCGAGAAGAACAAGGGCCAGATTCTCAAGAACGCCATCGAGTTCATTAAG
CAGCTCAAGGAGCAGGACGACGCGCGGACTCAGAAGGCTGCCATGGACAAGTTTAGTCTC
ATGAACCAGGTGACGGAGACGTCGGCGCAGAACAACCGGCTCAAGATTGAGCTGCAGCGG
GCCTGGCGGGAGGCGGAGACGTGGAAGGGCAAGTACCAGGAGCTGGAGGGGAAGAAGGAG
TGAGGCGAGCGGCAGAGCCATGGGTGACATTGGTGTTGGATGAGCGCTGTCATATGGTGG
GTTGCAGGGACAATATCGCGAGTGACGTAACCGACCGCCCGTATCTTCCATGGTTCTGGT
CCGGGTCCCCTGCGCTCTGTCGCCTCGCCCCACTGTCGTCGCAATTAGAGGTAGATGGAG
AGAAGAAGAGGGAGAGAGATGGGTTATATATTGTAATTTTATGTTTGTGTTTTTAACCAG
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D24167g_CDS-001

Protein length: 321 aa.
Product: Basic helix-loop-helix (bHLH) protein
Gene: CBF1

>YALI0D24167g_CDS-001 MSAIRRTRSTTSEDEAITKRLKQEVMVSEEAIDDKDELNESDAAAAVAAVAAAVQEKKDH
DDSVKAADVLRQTLEHVNEHVTDDAQGHVPQQQQHQQQEQQGHVQQQQEQQGHVQQQDQQ
SHVQQDTQNHVQQQQQDPQNHVQQQQQQQGLGQHVSQDQGQGLDSHVHHGMTAINQHVPQ
QAHVTQPYELDLNPYNQAPNSAKPPVGSEQWHQMRRDNHKEVERRRRETINDGINTLAEL
IATSEKNKGQILKNAIEFIKQLKEQDDARTQKAAMDKFSLMNQVTETSAQNNRLKIELQR
AWREAETWKGKYQELEGKKE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG