YALI0D23485g

Overview

Description weakly similar to uniprot|P32901 Saccharomyces cerevisiae YKR093w PTR2 peptide transporter
Locus type CDS
Locus tag YALI0D23485g

Location

Species Yarrowia lipolytica Positions 3058219..3059958
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1740 (nuc.)
Previous locus YALI0D23463g Next locus YALI0D23507r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D23485g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D23485gYALI0D23485g_mRNA-001YALI0D23485g_CDS-001

Nucleotide sequence

 

>YALI0D23485g
ATGACTCAACATCTAGGAGATCATCTGGAGGACCACCTGGAGCCTTCCAAAGAAGACGGT
CTTTACTACAAGGACACTGACCAAAAGACTACCCACTCTATCGATAAAGACGACAAAAAC
GAAATTGAATTCACCGAGATTGAAACCACATCGATCATCTCCCAGGGATACTCTCAGACA
TGGGCCACCTACACCGATGAACATAACCCCGACGGGCTCAGAATTGCCACAGACGAAGAT
CGAGCGACTCTAAGACGAGTAGCTGCTCCAATTGGAGCCATGACTTACATGCTGTCTCTT
GTTGAGTTCGCAGAGCGAGGCTCGTACTATGGTCTGACCAACGTCATTTCCAACTTTGTC
CAGTTCCCTCTCCCTAAGGGCGGAAATGGCTGGGGAGCCACACCTGCCGGTTCTCAGTTG
ACAGCGGGAGCCCTAGATCAGGGTCTTCAAGTCGCCACGGCTCTGACTCTGGTTTTGCAG
TTTTTATCCTACTTGACACCTCTTCTAGGAGCCTACCTTGCCGATTCCAAATATGGACGT
TTCAAGACCATCTGGGCCGGTACGATCATCTGTGGAATTGGCCATATTGTGATTGTGATT
GCCGGAATTCCCGGAATCATAGAGCACCAGAAAGCTGCTCTAGGAATCTTTATTGCTGGA
CTAATGATCTTTGCCTTTGGAACCGGTCTCTTCAAGCCCAACTTGCTTCCACTATTGCTG
GAACAGTACAGAGAAGACAACAACTGGGTGAAGAAGATGCCCAATGGAGAACTCGTGGTG
ATTGACAAAGAATCGACTCTTCAACGAATGACTCTCGTCTACTACTGGTCTATCAACGTG
GGAGCTTTTCTTGGTCTGGGAACTGCTTATGCCGAAAAAAGAATTGGTTTTTGGCTCGCT
TTTCTGGTTCCCACTATTCTCTACTTCTTCCTCCCCCTGTTTCTCTGGATCATCAGAAAC
AGGGTTTACAAGGCTCCTGCTTCTGAAGATTCTCTCATTGCTGGATTCTTAGGAGTCATC
TACCAAAGACTGTTCAAGAAGGACTCCACATACTCCGAGAAGTTTCAAACTGACGTCTGG
GCCACTCTCAAAGCCACCCGCTTCTTCCTTTTCTTTCCAATCTACTTTATCAACGATGGA
GGCATTGGAGCACTGTCTAATTCTCAGGGTAGTTCAATGATCACCAATGGAGTCCCCAAC
GATCTTCTCAACAACTTCAACCCTCTCACGATTATTGTGGCAGTACCGATAGTCAACTAC
GGACTATATCCTCTACTGAGACGCTACAAAATCAACTTTCGGGCCTCGTTCCGAATCTTT
TTGGGCTTTATGCTGGCAGCTTTTTCTCCCATGATTGGAGCTATTCTTCAATGGAGAATC
TACGAGACTTCCCCCTGTGGATACTATGCCACCCAATGTGAAGCTGGAGTAGCTCCAATC
ACCATCTGGTGGCAAGTCTTCCCTTATGTCTGTACTGCTTTGTCTGAGATCTTTGCCATC
ACTACCTCATACGAACTAGCTTACTCTCTGGCTCCAGAACATATGAGATCACTTGTTATG
GCACTGCTACTGTTTATGTCTGCCTTCAGTACGGCTATTCAGACAGGTCTGACTCCGGCT
TTGGTCGATCCGCATCTCATTTGGCCGTTTGTGGGCATCTCAGCAGCAGGAGGAGCCTTC
GCCATCGCCTTTCTCTTTTGCTACTGGAACCTCGGAAAAGGTCAGAAGTTGTCAGTCTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D23485g_CDS-001

Protein length: 580 aa.
Product: Conserved hypothetical protein

>YALI0D23485g_CDS-001 MTQHLGDHLEDHLEPSKEDGLYYKDTDQKTTHSIDKDDKNEIEFTEIETTSIISQGYSQT
WATYTDEHNPDGLRIATDEDRATLRRVAAPIGAMTYMLSLVEFAERGSYYGLTNVISNFV
QFPLPKGGNGWGATPAGSQLTAGALDQGLQVATALTLVLQFLSYLTPLLGAYLADSKYGR
FKTIWAGTIICGIGHIVIVIAGIPGIIEHQKAALGIFIAGLMIFAFGTGLFKPNLLPLLL
EQYREDNNWVKKMPNGELVVIDKESTLQRMTLVYYWSINVGAFLGLGTAYAEKRIGFWLA
FLVPTILYFFLPLFLWIIRNRVYKAPASEDSLIAGFLGVIYQRLFKKDSTYSEKFQTDVW
ATLKATRFFLFFPIYFINDGGIGALSNSQGSSMITNGVPNDLLNNFNPLTIIVAVPIVNY
GLYPLLRRYKINFRASFRIFLGFMLAAFSPMIGAILQWRIYETSPCGYYATQCEAGVAPI
TIWWQVFPYVCTALSEIFAITTSYELAYSLAPEHMRSLVMALLLFMSAFSTAIQTGLTPA
LVDPHLIWPFVGISAAGGAFAIAFLFCYWNLGKGQKLSV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG