YALI0D22979g

Overview

Description weakly similar to uniprot|P53038 Saccharomyces cerevisiae YGR099w TEL2 involved in controlling telomere length and position effect
Locus type CDS
Locus tag YALI0D22979g

Location

Species Yarrowia lipolytica Positions 2980203..2983057
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2855 (nuc.)
Previous locus YALI0D22957g Next locus YALI0D23001g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22979g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22979gYALI0D22979g_mRNA-001YALI0D22979g_CDS-001

Nucleotide sequence

 

>YALI0D22979g
ATGCATAAGAAATCAGCCCTCAATCTCGCCAAACATCTAGAAATCATGGAAGCCATCTCA
ACCACGCGCAATACCGACTCACATGACCTCAAAATTACGCCAATCGACTCGTATCGCACC
GATGAAACACTTGACTCAAGCTCTATCCCATCGGTTACGCCACAGCAACTCATAGCCGAG
CTTTCAACCAAGTCATATCTACATCAATCGCCCGATGAGCGGACGAGGACACAAACAGAA
GCTCTCAACGTCCTTTTGAGCAACCCATTACCTGACCTAGACCACATTTCACCTCTTTTT
GCTAATCTCACTGGCTTGAACATTTTGATAGCTACAATCCGACTCTTGAAGAACGACAGC
AATGAATATACAGCGGCCAAAATGGACAATTTGAAGACAGTCCTGGGATCGGTCATGGAT
CTGGGATACGTGGAGTTTCAGAAAGAATCGAGTTCCGCCTACAATAGGGAGATTTCGTCT
CTGCTAACTGGATCGCGTCTCTTCAATGGTCTGGTGGAATTCGAATGGAACATTGAACAA
TATTTGAAATGGCTAGGAGGTGTGATTATATCACGTGACAACACGGCATCGCACGAACTA
ATCGGTATAATTATCATTTCAGCCCTCAAATTGCACACTAACAACAACTTCATCTGTTCC
TGCATCTACTCTTCTGCATTCATTCAACGACTTGTCACGGTCGCTAATTACACGAAACCG
TTCCAATTGAAGCAACTGCTCAGTTTCTCCATGAACTACTTCACTTCTGAATTTTCTGAC
GATGTTCAAATTGCTCCTCTGGCTGAGCTGTTAACACAGCTGAACATTCCAGTCATTGAC
CTCTTTCGACAAACAAGCACCGTCAACAGCCTGAATATGGTCAAGTCTCTACTAATCTCG
GCATCACGTGACCAGTCGATTTTCCAGGAGCAGGTCATGGGTCTTTTCAGTCTATGGGGG
TCGAAATTGAACATTTCAAAATCGCCCGTTGCCCTGCAACGTCATCAGACAGAAGTGTTA
TTCGTGAGTCTGTCTCTGCTGACTAAACCGTTCTTGCAGCAGCTGACTGCGACTCCTGCA
TTTCTGGATGGCATTACTAATCATTTATCTTCTCCTTCATCGCGGGTTCGAGATTTCGGC
ATCTTGATTGGTGAAAAAGTCGCTCAATATGGCTCTGTTCCTCTGAATTTCGGCATTGAG
TCTTCAGAAGACTGGTCTGGGTTGTCCGTTGACAAGATGGCTGACAATTCACTAAGGCTT
CTGTTTGACGCTGAAGGTGCTGATCCGGATGTAAGCATTCCCGACTCGGAGGCTCCGTCC
ATCTTTTCAGATGTGTTGAGTGAGAGAAGTGCCAAGCCAAACACTCAAAGCAGGTACCAG
AAGCTCGGGTTTGATGTCAGAAGTCACATGAAGGATTCTGATGACGAAGGAGAGGATTCT
GACGATGAAGACCCCTCGAACAAGACAGTCAGCAAACCAGTGTACATCAGACAACTTTTG
GAGTACTTCAAGGCACCAGACGGCGACGACCAGTACGACAAGCTAGATATTGCCCTGAAA
ACGGCTGCTAGGCTCATTCTCGAAAAGAGAAAGTATGGAAACGAGGTCAAGGTGCACGCT
AAGGATCTGGCCAAGGCCCTGGTTCAGTTCAAGGATAATTTCGACTTTCCAGACTACCAT
AAACATCGAACCCAGGCATTGGTGGTGCTGGTGGGCACTCAGCCTGAGATTGCTCCGTAC
ATTGTGGATTTGTTTTATACGGCAGACATTAGCATTAATGATCGGCTGTTGTTGTTGACG
TCATTGTCTCTTGGAGCTCGCTTTGTGAATGGATTCACTGACACTGTTGATGTGAAACCA
ATGGAGATGAAGAAGTTGCCAGCAGCTGTTGCAGCTCGTTTCAACGACTTGAATATTGGG
ACCAAGAGTCTCACTGGAACTAGACTTACAGGAACAAGTGGATTGCTTGATTTAAATAAC
CAGTCAGCTCTGCCAGCTGGAGACGCTTCAGAGGACGGGGTGACAGCTCAGCCACTGAAT
AGCGTTTCTTCTGACCTCCAACAGACTCTTCTCTCCCCTACAATCGCCGAGTCCCGTGAA
AGTGAGGCTCTGAACGGCCCTAAAGTGCTCAGAGTCTCTTCTAGTCTCCAGAAACAACGC
CAGGGACAAACAAACACCACCATAACAACCAACCACTTTTCCAAGGTCGCGCATCTATTT
ATCTTCCCGCTGATCGACTCATGGTGGAAAGCAGGTACCGGAATCATGGCTGGCTCGTTC
TCGTCTATCATTCAGGCGCACTATTTCAAAACTCTCGCTCTTTTGCTGTATACAGCTGCC
CCCAGTGCTCCAAAACTGACCGATATGACGTCAGAGCTGCTGGCCATGCTGCTAAAGCTG
CGCTCCTACGTCTACATTGACGATCCGCAGGTGATTGAGTCCGCTTGCACCTGCATTTTG
GTGGTGCTAGACACTCATTCGGACGAGTACATTGTGCAAAAGTGGCCTCGTGAGTTTGTC
GATCTCCAGAAATGGCTGGAAGATGTCTGGGAGGGAGTTATCGATGAGAGGGTCAAGGGA
GTGGCTGCAGGAGTGTTATACCAGATGAAAAAGTTGGGCGAAAAATGGAGGAGGTCGCTG
GTAGCATACTAAGTGAACGGCCAACTCTCCAAGTGAACTCCAGGGTGACCATGGTTAGAG
AATAAATACCAAATTTCACTGTATGACAAGAGGGTACATTTTAAATGTACAGTGCTCAAG
CTCCTCCACACAGCATCAATAATCGGTATTGTACTGCATGGTAGCCCACAAAAGACTCTA
CTATTTTTTATAGTTTAATGAAGAGTTACTCAGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22979g_CDS-001

Protein length: 884 aa.
Product: Conserved hypothetical protein

>YALI0D22979g_CDS-001 MHKKSALNLAKHLEIMEAISTTRNTDSHDLKITPIDSYRTDETLDSSSIPSVTPQQLIAE
LSTKSYLHQSPDERTRTQTEALNVLLSNPLPDLDHISPLFANLTGLNILIATIRLLKNDS
NEYTAAKMDNLKTVLGSVMDLGYVEFQKESSSAYNREISSLLTGSRLFNGLVEFEWNIEQ
YLKWLGGVIISRDNTASHELIGIIIISALKLHTNNNFICSCIYSSAFIQRLVTVANYTKP
FQLKQLLSFSMNYFTSEFSDDVQIAPLAELLTQLNIPVIDLFRQTSTVNSLNMVKSLLIS
ASRDQSIFQEQVMGLFSLWGSKLNISKSPVALQRHQTEVLFVSLSLLTKPFLQQLTATPA
FLDGITNHLSSPSSRVRDFGILIGEKVAQYGSVPLNFGIESSEDWSGLSVDKMADNSLRL
LFDAEGADPDVSIPDSEAPSIFSDVLSERSAKPNTQSRYQKLGFDVRSHMKDSDDEGEDS
DDEDPSNKTVSKPVYIRQLLEYFKAPDGDDQYDKLDIALKTAARLILEKRKYGNEVKVHA
KDLAKALVQFKDNFDFPDYHKHRTQALVVLVGTQPEIAPYIVDLFYTADISINDRLLLLT
SLSLGARFVNGFTDTVDVKPMEMKKLPAAVAARFNDLNIGTKSLTGTRLTGTSGLLDLNN
QSALPAGDASEDGVTAQPLNSVSSDLQQTLLSPTIAESRESEALNGPKVLRVSSSLQKQR
QGQTNTTITTNHFSKVAHLFIFPLIDSWWKAGTGIMAGSFSSIIQAHYFKTLALLLYTAA
PSAPKLTDMTSELLAMLLKLRSYVYIDDPQVIESACTCILVVLDTHSDEYIVQKWPREFV
DLQKWLEDVWEGVIDERVKGVAAGVLYQMKKLGEKWRRSLVAY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG