YALI0D22957g

Overview

Description weakly similar to uniprot|Q12303 Saccharomyces cerevisiae YLR121c YPS3 GPI-anchored aspartyl protease 3 (yapsin 3)
Locus type CDS
Locus tag YALI0D22957g

Location

Species Yarrowia lipolytica Positions 2977450..2978863
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1414 (nuc.)
Previous locus YALI0D22935g Next locus YALI0D22979g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22957g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22957gYALI0D22957g_mRNA-001YALI0D22957g_CDS-001

Nucleotide sequence

 

>YALI0D22957g
ATGCTCCTTAGCAACATCCTACTCCTTTCTGTGGCATCTGTGGCCTCCGCAGGTGTTGTA
CACGCCCCCCTCACTGCCCGGTCAATCTCCGAGTCTCCCCAGGTCGCTGCTTATCTAGCC
AAACGAGACATTTACCATGCTACCCCGCAGATGGGTAGATTGTATTACGAGACGGAGCTC
GAGATTGGAACTCCCCCGCAAGTGGTCAAGGCCGTCTTTGACACCGGATCTCCCCTGCTA
TGGGTCCATGGCTCCAACTCCACTCAGTGCCTGCAGGGTCATTGCCAAGGCAGCTTCAAT
GTATCCAAGTCGTCCACCTGGCACTACCTCAGTGAGAGCAACAACTGGGGCGGTATCGGC
AACTGGGGAAATGAAACCGTCTCCTACGCCGGCCAGACCCTCACAGACTTCGAGACCTGG
GTTTCCAAGGGAGATCCGTACATGTGGTTTGAAATTGGCATCTTTGGCCAGTCAGGAACT
GATGATCCTAGACAGTCATTTGTTCAAGGTCTGGCCGACTCAGGAAAGATCTCACGAGCT
GTCTACTCTCTCAACGCCGAGAAACCCATTCTTTGGAATAAACCGTCCAGCAAAGGCACC
GTAAACAACGTCTACTATGGAGGTTATGATCGAGCCAAGTACCAGGGACCTCTGACGACC
ATCAAGTGCGATCATCATAACGGTTATGCCATGCCTCTGGGCGGTATTTCCATTGAGGGA
AAGCGGGTCAAGACCACCCGAGACTATCAGATTGTCCTTGACACTGGAGGAATCAATCTT
ACCCTACCTAATGGAACTATCAAGGCTCTGTCCGAGGCCTACGGCGGTAATGGCGTCTAC
GAAGCTCCTGGTTACTTCAAGTGCAAGTGTGATACTAACCCCGTTGTTACTCTCAACTTT
GGATACACCGATATCGACATTGATCTCAAACCCTACATGCTGCCTTCTCCCCATGGAGAC
TGCTGGATTGGTGGCATCAAACCTGTTAGTGACGATACTGATATTCTGCTTAACGGTCCT
CCTGTCATCTCCCAGGCTTTGGTTATCTACGATAATCACAGAGACACCATCACTATTGGC
AAGGCCAAGTTCACCGACGAGTCTGACGTGGTTGAGATCACAGGAGATATCCCCGGAACT
GTCAATTACGAGGATTGGTTAGCTGGTAAGCCTCTTCCTAGTTCTGTTGTCTCGTCGACC
ACTACCTCTTCGGCGGCTTCCTCCACTGTTCAGAGATCCACTCTCGCCATCGTTACTACC
TCCCAGCCCAAGGAATCTGCTCAGCCTGAGGAGTCGGCTCAGCCCGATGAGTCTTCCCAG
CCCGAAGATCCTTTCGACTTCTGTGATCTCTTTGGTATTTTCTGCTAGATTTTCAATTCT
TTAGCTTCTCCTTTCAATATATCATTTTTTTGCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22957g_CDS-001

Protein length: 456 aa.
Product: Conserved hypothetical protein

>YALI0D22957g_CDS-001 MLLSNILLLSVASVASAGVVHAPLTARSISESPQVAAYLAKRDIYHATPQMGRLYYETEL
EIGTPPQVVKAVFDTGSPLLWVHGSNSTQCLQGHCQGSFNVSKSSTWHYLSESNNWGGIG
NWGNETVSYAGQTLTDFETWVSKGDPYMWFEIGIFGQSGTDDPRQSFVQGLADSGKISRA
VYSLNAEKPILWNKPSSKGTVNNVYYGGYDRAKYQGPLTTIKCDHHNGYAMPLGGISIEG
KRVKTTRDYQIVLDTGGINLTLPNGTIKALSEAYGGNGVYEAPGYFKCKCDTNPVVTLNF
GYTDIDIDLKPYMLPSPHGDCWIGGIKPVSDDTDILLNGPPVISQALVIYDNHRDTITIG
KAKFTDESDVVEITGDIPGTVNYEDWLAGKPLPSSVVSSTTTSSAASSTVQRSTLAIVTT
SQPKESAQPEESAQPDESSQPEDPFDFCDLFGIFC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG