YALI0D22913g

Overview

Description similar to uniprot|W3WPP1 Pestalotiopsis fici hypothetical protein PFICI_13606
Locus type CDS
Locus tag YALI0D22913g

Location

Species Yarrowia lipolytica Positions 2966419..2968406
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1988 (nuc.)
Previous locus YALI0D22905r Next locus YALI0D22935g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22913g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22913gYALI0D22913g_mRNA-001YALI0D22913g_CDS-001

Nucleotide sequence

 

>YALI0D22913g
ATGCAAGAATCCCAGGAATACCTAGACTTAGACCCAGGTTCAGAGAAAATAGGAGATACC
CCATCACCTGATATAGCACGTGATTTGGAGGAGCAAGCCGAGAAGGCTGCTGAGTCAGCG
GTAGATGGCCAGCGTGCTGACTCACTCCACAGACACAACTCTTACCCTATCCCACCCTTG
GCTGGACTGACCCTTCAGAGAACACTTACCCATCGTTCCAGAGTATCAAGGCTGAGTCAT
CACTCCGAGGAGCAGTCAGGTGACCAATCTGGTAACGCGATGAACTCGGAAACCCCCGCC
TTACCTGGGCATGTGACTCAGGACCATTTATCTCAAACACGACGATATCTTATTTGTTTC
ATGTTGTGTGTCTGCACACTTCTCGTGGCTATCGATGAGACTATCATCACTACAGCGCTT
CCTGAGATTGTGGCTGCCTTGAAATCGTCTTCTGGATATACGTGGATTGGAACCTCTTAT
CTTCTTGCATGTGCTTCTTCCATGCCTGCATATGGAGCTCTTGCAGACATTTTTGGGCGT
AAACCGATCATTCTCTTGTCAATTGCACTGTTCCTGATTGGCTCTGCTATTGCTGGAGCT
GCCACCGACATGGGCATGATGATCAGTGGACGTGTCATTCAGGGTATTGGAGGAGGAGGT
ATTTCCAACCTGGTGAACGTCATTGTGGCCGATATCATTGATCTCAAGTACCGAGGTACA
TTTATGGGTGCCATTGGAGCCACCTGGGCCGTTGGAGGATGCATGGGACCTCTTCTTGGT
GGAGCTTTTGCCTCTGGAGGACAGTGGAGATGGTGTTTCTTCCTCAACCTGCCCATTGCA
GGGGTTTGCTTCATTTTCATGGCTTGGCTGGCTAACATTAAGTCTCCTCCTACGACGTTG
AGAGACGGACTCAAACGAATCGATTTTCTGGGCATTATTCTTATTACGTGCGCCACTGTG
TGTCTTTTCTTGGCTCTGGACTGGGGAGGAGTTCATTTTGCCTGGAACTCTGCTCCTGTC
ATTGTGTGTCTGGTTCTGAGTGGAGTTCTTTACATTGCTTTCGTCCTGTGTGAAAAATAC
ATCCCCAACGAGCCCGTGATGCCCCCCAGGTTATTCACCAATTTCTCTCGAACTGGAGCT
CTTCTCTGCACTTTTTTCCACTCCACCACCTTTATGGCAGTTTCCTACTTTACGCCCTTC
ATGTACCAGTCTGTTTACAACAAGAGCCCCATTGGAGCAGCCGTCTACCTGCTTCCCCAG
GCCATTGTCATGGGCCTGGCTTCTGCTATCAGTGGATACATCATTACAAAGACAGGCAAG
TACAAGATCATCATGATTGTTGGCTTCTCCCTGGCAGCCATCTTCAACGGAATGATAGTC
ACTCTCAATCCCGACTCCAACACCGCCAAGCAGATCATGTGGGTCACCGTCTGGGGTATT
GGTATTGGTCCCAACTTTGAGTCCACTCTGATTGCTCTACATACCCATATCAAGTCTCAG
GACATTGCCACGGCTACATCGACCTGGGGCTTCCTTCGAACCATCGGGTTCTCCATCGGT
ATTGCTATTGGTGGAGTTGTGTTCCAGAACAAGATGCAGACTGAGAATGAAGAACTGGGA
CACTTGCTGCCTGCGGACTTGAGAGAACTACTGACTGGTGCCGATGCTGCTGCTTCTACT
ACACTCATCAAGAACTACTCTGAGCCCGTTCAGAAAGTAGCCAAGCTCATGTACTCCAGA
TCCTTCAAAGACATGTTCTGGACGTGTCTGGGCTTGTGTCTGGGCTATCTCTTTGTGTTC
CTCATCAAGGAGCGGCCTCTGGAGATGAAGGACGCCAAGGGCGAGACAACTGAGACGGAG
GACGAAGTTGACCAGATTGTTGATGTGATTGTCGACGACTTCGAGGGCAACCAGAAGCAC
AGGGACGGGGCCTAAATATTTAGGACACAGTAATTATTTATTTGCAATAAGCCAGTACAA
GTAGACGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22913g_CDS-001

Protein length: 645 aa.
Product: Conserved hypothetical protein

>YALI0D22913g_CDS-001 MQESQEYLDLDPGSEKIGDTPSPDIARDLEEQAEKAAESAVDGQRADSLHRHNSYPIPPL
AGLTLQRTLTHRSRVSRLSHHSEEQSGDQSGNAMNSETPALPGHVTQDHLSQTRRYLICF
MLCVCTLLVAIDETIITTALPEIVAALKSSSGYTWIGTSYLLACASSMPAYGALADIFGR
KPIILLSIALFLIGSAIAGAATDMGMMISGRVIQGIGGGGISNLVNVIVADIIDLKYRGT
FMGAIGATWAVGGCMGPLLGGAFASGGQWRWCFFLNLPIAGVCFIFMAWLANIKSPPTTL
RDGLKRIDFLGIILITCATVCLFLALDWGGVHFAWNSAPVIVCLVLSGVLYIAFVLCEKY
IPNEPVMPPRLFTNFSRTGALLCTFFHSTTFMAVSYFTPFMYQSVYNKSPIGAAVYLLPQ
AIVMGLASAISGYIITKTGKYKIIMIVGFSLAAIFNGMIVTLNPDSNTAKQIMWVTVWGI
GIGPNFESTLIALHTHIKSQDIATATSTWGFLRTIGFSIGIAIGGVVFQNKMQTENEELG
HLLPADLRELLTGADAAASTTLIKNYSEPVQKVAKLMYSRSFKDMFWTCLGLCLGYLFVF
LIKERPLEMKDAKGETTETEDEVDQIVDVIVDDFEGNQKHRDGA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG