| Description | similar to uniprot|P35194 Saccharomyces cerevisiae YBL004W UTP20 Component of the small-subunit (SSU) processome, which is involved in the biogenesis of the 18S rRNA |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0D22440g |
| Species | Yarrowia lipolytica | Positions | 2860579..2868699 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Antisense |
| Chromosome | YALI0D | Total length | 8121 (nuc.) |
| Previous locus | YALI0D22436t | Next locus | YALI0D22462g |
Here is a representation of the structure of the locus YALI0D22440g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0D22440g
AGAAACGGTCCAACATGGTTCTTAAAACTGGAACCGAGTCGGGTAAAAACCACCGAGTGA
GTATGGGCGACATGGAGGGCACATGAGCTGTTGGACCGCCTCTAGAGCGATTGTGAGAGG
AGTGGAGCGCCATTCCATGTGGATCTGCAAACAGTAGCCGAAGACGGATCTGGGTGGCAA
TTTGGAGATCGATTCGAGCTACAAGTATCGTAGACGGTTTTCATGGGTCTGTACGAGCAT
ACTGATGTCACTAGCTGTGCTTACTGGGCGATCGCCACCGCCAGGATCATAGCTCCAGGA
GATACGTTAGACCTACCGGATCAGCTGTTGGGCTGAGACATTCAATTCCATACTAATGCA
GTTCAAATCGTTCCGAGAACGTCTTGATGCCATCAAGATCGATCCGCTGAAACGGCAGAA
GAAAAAGCTGTCGCGGGACACGGACACGTCGCATTTCATTGCATGTTACACGACCCATGT
TGAGCTGAACTTGTCCACCAGCTTCACTCGTTTTATGGAAAAATGTGGAAAGTACGCCGT
GTCGCTGCCCATGGTGCTGTTCCACAAGGAGGAGATTTTCGATGGTTTGGAGGAGTGTCT
GGAGGATGGAAATGAACACAGTGTGGAGGCCCTGCTAGAGTGAGTATGAGAAATGGAGGA
TGGAGAGGAAGTCCCCGATACAGAACTAACCCAGTCTACTCACCAACTTTGTCCGCGACC
TGGGCGAGGAGTTCGAGCCATACTTCCCCCGAACTCTCGCACTTCTCATCAATCTCACCT
ACCACTTCAATCTCGAGGTGGTCGAGCACACTTTCAACGCAATGGTGTACATTTTCAAGT
ACCTGGCTCGTCTATTGACTAGCAACCTGGTGCCCCTGTACGACAGCGTCAGTGTACTTT
TGTCCCGAGGAGATGAAGATGTGCAGATGATTGAGAACGGAGAAGAAGACGAGGAGGAGA
TCCCGGAGGAAGACTCTGACGACGAGGAGGATGACAAGCCCAAGCCTAAGAAAATCAGAC
CGTTTGTGCGAAGATTTGCCTCGGAAACACTGGCCTTTCTGATCCGAAAGTGCTCCCAAG
ACGGTCTGGACGTGATCGTGCCGCACGTGATGAGCACGCTGGAGGGCTCGTCACGAGATT
ACGTCTCTGCCGTCTCCGCCATGTTTGCTGCGTCTATCAAACACACCAAGGGAGCTCTTC
ATTCAAAGACGGACTTGATTCTTCAAGTGTTATTTGCATGTGCGGCTTGTGACGACAACA
CAATCACCGAGGCCGACCGAGTACACGTGACCATGATTTCAGAGACTTTGGCCGTTGTGC
TGGAGCATATTGAGGACCCTGTCATGGGCCAGGCCGTGTTTGATACCTTTTACCAGTATG
CCCAAGGCAACGGTAACTACGATACTGTGACCTATCTGACTACTATAACCGCCATCCGAA
AGGGTTCCCGAGTTCCTGATTGGGCTCGAGTCTTCCAGGAGGCCAAGGCTTTCTGCTCCA
CTCTCTCCGACAAGGCCATTGTCGAGTTCGCGCTCCTGGTGGTCTCGCTCATCCAGAACG
GCGCCCAGAGCAATGTGCTGGCCAACCATACGTCCTTGCTCACCACTCTGTCGTCCAAAT
CACGTGAGCAATACTTTGTGGCGTTCCAAATTCTTGCCAAGGTCCAGAGTCAACGGTTCA
CCGATATCTGTGTCAAGTACATTCCTCAGTTGATCAGCATGTTCTCTGATGATCTTTCGC
AGATTGCACTCTTTGTCGACAGTCTGGAGAAGATCAAGTGTCTGGATGCCTGCAAGGTTC
TGAAGAAGGAGATTGTAGCGTTTGGCAAGAAGAACATGTCCACTGAAACAGTCTTCAACC
TCTATTGGCGAATCAGAATGTTCACCAAACTTTCTAATGTCGATATGAAGAAGGAGATGA
CCGAGTTTGCCATTGAGCTACTCCCCAAGCTCTCCGCTGACGACGTGTATACTGGAGCTC
TTTACGGAGTCACTCTGAGTCTGATTGGGTCATTGGGAGACGATAAGCAGCTGGTGGAAC
GAGCCCTGGGCCGCCTGGAACACTTTTCACAAATCGAAGGCTACATTACCGGTCTGCTGG
CCATTTGTGACTCTTCAACCAAGCTGGATGACTCGTCACTGGTGCTGCTGACCCAGAACC
TGACCTCCGCAAACACCCACGTGCGGGACGTGACGCTGAGCCTCATTTCGAAGCTGTCAC
GTGGCCAGAACGCGCTCGTCAATGAGTGCAAGGTCATTTCATCCATTCCGTTTGATTATA
CCACGTTGCGGTCTCTTGTTCAGCGAATCGAGAAGCTCGGAGAAACCTTCTCCCTGTCTG
GGTCAGATACGATTGCTGATTCAGCAGTGCCTCATTTCCTGTTTGGACTTCTTACTGTTC
ATTTTACGCCAGCTCACGAGGCTGCCATCAAGGCCCTCAAGAATGTTGCCGAACGATTTC
CGGAGCTGGTGTGGAAGTTGTCCTACAACGTTTTGCAGGCACGTGACCTGGTCAAGGTTG
ATGACGACTGGGTGCCCGAGCCACGTCATGTTCTGGACAGCCCCTTCACCGACTCCATGT
CTCCCGACTATAACTTGAATGGTTTGTTTGAGACGTACAATGAGCTTGTTTCTCGCGATA
GCAACGGAGCTCTGTTTGAGGACTTTTCCGAGTCGGCTTTCCCTGCTGAGGAGCCCTTTT
ACCTGCGAAACAATGTGCTGAAGGTGCTCAAGGCTGTTCCTCGGGTGTCTGAGAACCATG
TGATGGAGCTGGTTCCCTATCTTCTTTGGACTGAGGGTGTTTCTCGAGATAAGCAGGCTG
TTGAGTCTTCCGAGTATGGACTTGCCGACTCGTGGACCCTCAAGGACAAGATTGTGTTGC
TGGACATTTTTGCTCTGTTTCACAACACCAAGAACTGTCCTCGAGCCGAGGAAATTTATC
AGAGATACCTGCTGCTTCTGACCAACAAAATGAACTCTGTTCAGAAGGCAGCTCTTCAGT
GCATCCTATCCTGGAAGAACAAGGTGGTTCGCAAGTACAAGGACAATCTGTTCAACTTGC
TGGAGGACTCGCAATTCAAGGACGAGATGCTGAGCTTCCTCAAGCCCTCAAAGGACCGAG
TTTTGCATGAAGACGACGAGCATGTCATCTTCCCTCTGGCGCTCCGGATTCTCTACGGAC
GATCTCGAGTGGTCAGCAAGAGTGGACCGCGGTACGGAAAGCGGTTCGCGGTGCTTTCCA
CTCTTCTGGCTCTACCCGAAAAGTACACTCGCATGTTTGTTTCTCTGGCAATCGACCAGC
TGGAGATTCCCAAGGACTTTGACATTCTCGGTGATGACCACGTGATCGAGCCCAATCCTC
GCGACCTGGAGACCCTGTCGGGCAACTGCGAGACTCGAACTGCGGCGTCTCAGATCTTCT
TTCTGGAGCTGGCCATGGATCTGGGTAAGCAGATTGGAGCCAAGTTACATTCGTCCATGG
ACATTCTGCTCAACTCGGTGCTGTATTGTATGCATTATTCGTGTCTGATTCCAGACAACA
CCTCAGCTCGTCGAATGTCTCGGTACGGCTTCAAGGTGCTGACTCAGCTCTTCCTCAAGA
TAAAGGACTTTGAATGGCAGCCCTACCTGACCCCGATCTACTACCCTTGTATAGAATCTA
AGCTGCCGACTTTTGTTGCTGGAAACACCAAGCGACCCAGTGCTCTGCTCCAGATCACGT
TTCTGTGGGGATCACGTGCGCAGGCCTTTCCCCTGTTTGTGTTTGAGGAGGTGGCTTTGC
TGAAGCAGGTGGTGGCTCTGTTGAAGGTGTCTGATCTGCCCGACTCGACCATCAAGGACT
GCATTCTGCTGTGGTCTTCGATTTTCGCCATTGAGGATCAAGTGAATGCTGGCGAGTTTG
ATCACGTGGTCGACTCGACGATTCCTCTGTTGTTGCCCCGCATTCCCGCCCTGCTGGACG
AGCACAGGCGCAACTTTGACGTCGTGACCACCATTGCAAAGCTGCTGGTGATCACGTGTC
AGAAGGGCTATGCACGTGATCAAAAGGTCAAGAGCGATCTGATTGCTGTTGTGACCGATC
TGGTGGTGAACAACAAGGTATCGTGGTCCATTCAGGTGTCTCTTTTGAACGCTCTCACCG
AGCTGGTTCCGGTGACCACCCTCGCCAAGGAGCACGTGACTGAAATGTATCTGAACCTGT
CCACTCTTTTCCAGACCATCAAGTTGCAGAGTGCACGTGACGCGCTGGTGAACGCCTTTT
GTGTTGTCTGCACCAAGCTTGGAGGTGTCGATCGCACGGCTGAACTTGTCAGCCAGCTTA
ACTCGGTTGGCAAGCGGCTTAATGAGCCCGACTGGGACACTCGAATGGCCGCCTACAACG
ATATTACTCAGCGGGAGTTCTCGTCTTTCTCTGCCATGGAGTGGACTCCTCTAATTAGTA
ACATGTTGCATTTCATCCGTCTTGACGATCTGCCGATCCGACAGAACTCCACTCTGGTGC
TGATGCGGTTCTTCGAGTCAATTCAAGAGTCCCAGCCCGACAAGATTGAGCTCATCGACG
ACATTGTCATGCCCGAACTGGTGGTGGGAATGCGAGAGCCGCAGTTCAACATTCGAATCG
AGTTTGTTCAGGTTCTTGAGAACCTCGTCAAGTTGTCTGAGCGTCATTTGTTCGAGCCCC
TGAACGACCTCGTCACTCTTTTGGCTCCCAACAAGTCCGCTGATGCCAACTTTTTCTACA
ACGTGATGCATGTGCAGATTCTCCGACGACAAAAGGCGGTGCAGTATCTCAACTACTTTG
TCAGAAAGGGGGCTATTTCTTCAGACAACATTGCCAACCTTCTGTTGCCTCTGATTGAGC
ATTACGGAAAGAGAAACAACCAGGAGACGCAGAACTTAGCCCATATGACCTACAAGTGCA
TTGGTTCCATGACCCGGTTTGTCACCTGGGAGCAGTACGTCAAGATCAGCAAGCGGTTCG
TGGGCTACCTCCGAAAGGGCTGCCAGAGCCTGAAGCAGGCCTCCAGAATGCTAGCTGCTC
TTGGTGTGGCCTTCACCGAGGACGACTCCCGCGAGGAGGAGGACGAAGAGGAAGAGGAGG
AAAACACCGAGGAAATTGCTGAAGAGGTCGAAGACGAGGCCATGTCTGATGACCGTGAGA
ACTACTCAGATGCAGTCTACACTGTTCCACGAGCTCCCAAACTCATCTCCATGGACACGT
CTCTGTTTGGAACCACCTCTACCCCTGAAGAGAGATCCGCTTTCCTGCTGGAGAACGTGA
TTCCTCCCATTCGAAAGACTCTTCGTGCCCACTCCAATGAGCAGCTCACCGACCGAATCC
CTCTCGGTATTCCCGTCGTGCGGTTCATTGTTGCTCTGCCTCCTGCCCAGGTCATGACCG
TGCTGCCTGGTACCCTAACCACTCTCTGTCAGGTTATGAGAGCCAAGCAGCAGGAGCTCC
GAGACGAGATGCGGAAGCTTCTGGGCCAGATTGCCGAAATTCTGGGGGCCAGGTACCTGC
TCTTCCTACTGCGAGAACTCAAGTCTGCGCTCCGACGAGGAGCCCATCTGCATATTCTGG
GCTACACTGTCTGGTACATTTTGTCCACCATGACTCTGGAGCACGCCGATCTCGATCCTG
TGGCTGCTCTGTGTTCTGAGATCATCATGGAGGACGTCTTTGGAGTCACCGGTACCGATA
AGGACGAAGAGGACTACCGAAGTGCCATGAAGGAGGTCAAGACCCAGCGGTCCTACGATA
CTGCCGCCATTCTGGCCTCCAACGTGTCTCTGGAGTCGTTCTCCAAGCTTATTGACCCGG
TAAAGACGATCCTGCTGCATAAACGTCTGACCCTTGGAGTCAGTGAAAAGGTGGAGACCG
TTCTGACCCACCTGTCTCGAGGTCTCAAGCGAAACGCGGCCTCCGAATCGCAGTCTGTGT
TGATCATGTGCTTCGAAGTGTGGAAACTCACCCAGACAATTGAGAGCAAGTACAACGAGG
AGGAGGAGGCAAAGAGCCAAAAGATTGTGGCTCTGGACGACAACGAAAGCGATTACATCG
TGAACCTCGACGCCAAAAGTCACGTGACTAAGCTCCGGGACGGCATGCACATTGCCAACC
TGAATCTGCTTGTGGCCTTCACTTTCGACACTCTCAAGAGTGTTTTGAGCAACAATCCCG
AGCTCCGAACTGCCAACAACCTGTATGGCTTCCTACAGCCTCTCACACAGTCTCTTTCAA
ACACCCATGAGAATGTTCAAGTTGGAGCTCTGCGAGTCTTGTCAATGATTTGTGACTTGG
ATTTCCCTGACATGGACTCATGGACTCAAAAGTGGGGCACTGAGACGCTCAAGATCATTG
CCAACTCGTCCGACACCAAGACGCAGCTGGTTCAGAACGCCTTCAGACTGCTGACCAAAT
TGTTTGAATGTTCTGAGTCGTTTGAAGTCAAGGAGAGTGCTCTGGGCAACATTCTGACCC
GGATTCTGCCTGACCTGGTCGAGTCGCAGGGCCAGAACATCACCTTCAACCTTGTCAATG
CCGTTCTGGGCCGTCAGATTGTCATTTCCGAGGTGTACGATGTCATGAAACAGATTGCCA
ACATTATGATCACCCATCAGCAGTCTGAGACCAGAGACCATTGTCGAGAGCTATACTTTA
CGTTCCTGACCACTTACCCTCAGTCTCGTGACCGTCTCAACGCTGAGTTCCAGTTTCTCA
TTCACAACTTGGATTATCCGTTTGATTCTGGCCGGCAGTCTGTTCTGGAGATGATCCACC
GTCTTTTGACCGAGGTTAGTGACGCGCTGCTCAAGCAGACCATCACCTCGTTCTTCGTGG
CTCTCACCCTTGTTCTCTATAACGACGACTCCTCCACTTGTCGAGAGATGGCCTCCACCA
TCATCAAGATTCTGCTGCAAAAGTCGTCGCAGGGTGTCGAGCAAAAGTTTGTCCAAGATC
TCATCTACTCTTGGATCGACTCCGATCTGTCTTCTGATCTGCTCAAGGTAGCTCTCCAAG
TGGTGGGTTTCTATGTGGAGTCTGAGCCCTCTGACAAGGACAAGATCCTCAACAAGGCCG
AGAAACAAGTGATTGCCATCATTGCGGCACAATCGTCTCTTCCTTGGGACCTTGTATACT
TTGCGATGCAGCTGTGGGGTCGCATGTGCTCCCACAAACAGGTGCAGTTCACCCAGACCA
AGTACTCGACCATGTGGGACGGGGTTGTGGAGTGTCTTTTGTATCCCCATTCCTGGGTTC
GTCTGAGCGCATCTCGGGCTGTGGGACTCCTGTTTGATGCTTTCAAGGCGCGTGACAGCG
ACTCGGGACTGGTGTTCTCCAACAGACAGCTCCAGACGGTGGCTTACCGACTTGTTCGCC
AGCTGTCGACCCCTAATGCCTCCGACAAGCTGTGTACTCAGGCGGTCAAAAACCTGACAT
ACATTGTGCAGGAGTGGGAGAATTCGTCGTACCTATACCAGAAGTCCGACTCTGAGAAGG
ACGAGGATGACGCTACCGAGACCGGCTCGTCTCTGGCCACCGACTGGCTTCTGGGCCGAG
TGTCTGGTATCATTCGAACCACCGTCAAGGGCAAGGACAAGCTGCATGCCAAGCGCGCAT
GTGTTCGTTTCCTAGCGGTATTGGTGTCTCTTCTGAGTGAATCTAGGGTGATGGAGATTT
CTGAGCACGTCATCTACGCGCTGTTCACCACCATGGACCAGCACGAGGCTGCCGTGGATT
CTACTCTTCGAGAGCTGGCGTCGGAGACTCTGGAAATGCTCAAGGCCAAGATTGGCGTCT
CTGAGTACCTTGGAAAGCACGCCCAGGTGTCGCAGATGGTGTCGCAAAAACGTCATGAGC
GAAAGCATGAGATGGCGATGCTTGCTATGTCCGATCCTGCCGCCTACTCTGAGCAGAAGA
TGAAGAAGAACAAGAAGAAGCGAAAGCTTGAGAAAGAGAAGAAGCAGGCCGAAAAGCGTC
GAAAGCTTTAGACGGCGGAGGAATAGGATATTGCGGAGGAAAAAGGAACAAATGGGAAGG
ATTTTTTAATGAATTGATTGATTATGGTACTTGGTGAACTATGGTAGAAGAATAGATATA
GACACAATGTTTCGACTGTTG
Locus sequence
Up/downstream sequence
Protein length: 2539 aa.
Product: Component of the small-subunit (SSU) processome, putative
Browse the locus neighborhood with JBrowse:
ATG