YALI0D22352g - SSA8, SSA-B

Overview

Description uniprot|Q6C864 Yarrowia lipolytica YALI0D22352g SSA8/SSA-B HSP70 protein
Locus type CDS
Gene names SSA8, SSA-B
Locus tag YALI0D22352g

Location

Species Yarrowia lipolytica Positions 2843487..2845513
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2027 (nuc.)
Previous locus YALI0D22341r Next locus YALI0D22374r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22352g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22352gYALI0D22352g_mRNA-001YALI0D22352g_CDS-001

Nucleotide sequence

 

>YALI0D22352g
ATGTCTAAAGCCGTCGGAATCGATCTTGGAACCACATACTCGTGTGTGGCCCACTTTGCC
AACGACCGGGTCGAAATCATTGCCAACGACCAGGGTAACCGAACCACCCCTTCTTTCGTC
GCCTTCACCGACACGGAGCGACTGATTGGAGATGCTGCAAAGAACCAGGCCGCCATGAAC
CCGGCCAACACCGTCTTCGACGCCAAGCGACTGATTGGCCGAAAGTTCTCCGACCCCGAG
GTCCAGAACGACGCCAAGCACTTCCCCTTCAAGATTGTCGACAAGGGCGGCAAGCCCGTC
ATCCAGGTCGAGTTCAAGGGAGAGCAGAAGACCTTCACTCCCGAGGAAATCTCCTCCATG
ATCCTCGTTAAGATGAAGGAGATTGCCGAGGCCTACCTCGGAGGCAAGGTCAACGACGCT
GTCATTACCGTCCCTGCCTACTTCAACGACTCCCAGCGACAGGCCACCAAGGACGCCGGT
CTCATTGCCGGCATCAATGTGCTGCGAATCATTAACGAGCCCACCGCCGCCGCCATTGCC
TACGGTCTGGACAAGAAGGGCCAGGGCGAGCAGAACGTTCTCATCTTCGATCTTGGAGGA
GGAACTTTTGATGTCTCCCTGCTGTCCATCGAGGATGGTATCTTCGAGGTCAAGGCCACC
GCCGGTGACACCCATCTGGGAGGTGAGGATTTTGACAACCGACTGGTGAACCACTTTGTC
CAGGAGTTCAAGCGAAAGCACAAGAAGGACATTTCCACCAACCAGCGAGCACTGCGACGA
CTGCGAACCGCCTGTGAGCGAGCCAAGCGAACCCTGTCGTCGTCTGCCCAGACCTCCATC
GAAATCGACTCTCTGTACGAGGGTATCGACTTTTACACCTCCATCACCCGAGCTCGATTC
GAGGAGCTGTGTCAGGATCTGTTCCGAGGCACCATTGAGCCCGTCGAGAAGGTGCTCAAG
GACGCAAAGATCGATAAGGCTTCCGTGAACGAGATTGTTCTTGTCGGAGGTTCCACCCGA
ATCCCCAAGATCCAGAAGCTGGTGTCGGACTTCTTCAACGGAAAGGAGCCCAACCGATCC
ATCAACCCCGATGAGGCTGTTGCCTACGGAGCTGCTGTCCAGGCCGCCATTCTGACCGGA
GACACCTCCTCCAAGACCCAGGACCTGCTCCTGCTTGATGTTGCTCCCCTGTCTCTCGGT
ATCGAGACTGCCGGAGGAGTCATGACCAAGCTCATTCCTCGAAACTCCACCATCCCTACC
AAGAAGTCCGAGACCTTTTCCACCTACGCTGACAACCAGCCCGGTGTGCTGATCCAGGTG
TTTGAGGGAGAGCGAGCCCAGACCAAGGACAACAACATTCTCGGAAAGTTTGAGCTGTCG
GGCATTCCTCCTGCCCCCCGAGGAGTTCCTCAGATTGAGGTCACCTTTGACCTGGACGCC
AACGGAATTCTGTCCGTCTCCGCCGTGGAGAAGGGTACCGGTAAGACCCAGCAGATCACT
ATTACCAACGACAAGGGCCGACTCTCCAAGGAGGAGATTGACCGAATGGTCAACGACGCC
GAGAAGTACAAGGAGCAGGACGAGGCCGAGGCCAAGCGAATCGCCGCCAAGAACGGCCTC
GAGTCTTACGCCTACTCTCTCAAGAACACTCTGTCCGAGGAGAAGTTCAAGGAGAAGGTT
GAGGAGCCTGAGCGAGAGAAGCTCGAGAAGGCCATCAATGAGACCATCGAGTTCCTTGAC
GCCACCCAGTCCGGTACCACCGAGGAGTACGCCGACAAGCAGAAGGAGCTGGAGGGTGTT
GCTAACCCCATTCTGATGAAGTTCTACGGCGCTGAGGGTGGAGCTCCTGGAGGAGCTCCC
GGCGGACCCGGAGGCTTCCCTGGTGCTGGAGCCGGAGGACCACCTCCCGGAGCTGGCGGT
GATGGTCCCACCGTTGAGGAGGTTGACTAAATCACTTCTAGGTAGCCCCACCACAACGAG
CGTTGTATTTATAGATTCAATGAATATCAAGATGATTGAGTGAGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22352g_CDS-001

Protein length: 650 aa.
Product: HSP70 protein
Gene: SSA8, SSA-B

>YALI0D22352g_CDS-001 MSKAVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMN
PANTVFDAKRLIGRKFSDPEVQNDAKHFPFKIVDKGGKPVIQVEFKGEQKTFTPEEISSM
ILVKMKEIAEAYLGGKVNDAVITVPAYFNDSQRQATKDAGLIAGINVLRIINEPTAAAIA
YGLDKKGQGEQNVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFV
QEFKRKHKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARF
EELCQDLFRGTIEPVEKVLKDAKIDKASVNEIVLVGGSTRIPKIQKLVSDFFNGKEPNRS
INPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPT
KKSETFSTYADNQPGVLIQVFEGERAQTKDNNILGKFELSGIPPAPRGVPQIEVTFDLDA
NGILSVSAVEKGTGKTQQITITNDKGRLSKEEIDRMVNDAEKYKEQDEAEAKRIAAKNGL
ESYAYSLKNTLSEEKFKEKVEEPEREKLEKAINETIEFLDATQSGTTEEYADKQKELEGV
ANPILMKFYGAEGGAPGGAPGGPGGFPGAGAGGPPPGAGGDGPTVEEVD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG