YALI0D22154g

Overview

Description weakly similar to uniprot|D6WXQ5 Tribolium castaneum TcasGA2_TC005530 hypothetical protein
Locus type CDS
Locus tag YALI0D22154g

Location

Species Yarrowia lipolytica Positions 2816631..2819080
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2450 (nuc.)
Previous locus YALI0D22132g Next locus YALI0D22176r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22154g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22154gYALI0D22154g_mRNA-001YALI0D22154g_CDS-001

Nucleotide sequence

 

>YALI0D22154g
ATGATGGTACAGGGACGCCAGACATCTCTCAACAGCCTGTGGGGCATCCCGGAGCCGGTG
CCACATGATCCACCACTCGCTGCGGTTGCTGAAATCGCCCAGCCAACACAGACTAACCAA
GAATCACATCCACATCACCCCGGCAAGCTCATGTTTGCCCTTCCTAGCAACGTGCTACAA
CAACTGGAGACCGACAAACAGCACCAGTCACGCGACACAGACCGAGTAGCAGTGCCACCA
CCACGTGAGAAGCTCAAATTGACCTTCAAAGTCGCCCCGGATCAGCTTCGATTGATTGCT
GATCACAAGCCTCTTCCAAAGAAGGTCGTTCATCCGTTTTTCCAAAAGAAACAGAAGAAA
CAGAGCCACGTGACGGAAAAGACGATGACGCAACCCGCAACACAATCTGTGCAGGCTCAG
AAACAGAGTCACGTGGTCCAGTCGATTGGACCGGTTTCTAGAGCACCAAAGAAGCCCCCA
CCATCAGCCTGGTTTGGAGTCAAGAAGGAGAAAAAGAAGTTGACAACCCCGTTCCCGAAT
CACACAATGTTTCACGTGATTCCCGACAGTCACGTCACCAATGCGCCTGAGAGCCAGCGA
CTGAGCTTTCAGAAGCGATATTCCCGGGAGTTGGGTGCTTCCCACCGTCTAACTAAGACG
AAGAAAGGCGCCATCGATCTGAAGCTTCCTATGGTTTCTTTCAAGTCGAAAACACCCTCG
TTGCATCTTCCTAATCGTCATGTACTTTCGAGTGATGGCATTTTACAGCTTTCACGCGAA
ATATGTGGTGATCTGACTTCCAATTCAGCCATTCAGAGCCTCCTATCCAGAGTGACGACT
TTGTCAGCTTTCGACACTGCTGATAGAGAAACGCAAATGTGGGTGGACAAGTACCGACCT
CGGTCGCGTCATGAACTGGTTGGAAGCTCCAAGCATGTGTCCAACATCGTCTCTTGGCTC
AAGATACGGCTTTCGAGACGTTCATGTCTTGTCAAAAGTCCTCATGCGACTCCTTCGTCA
GGCTTCATCGTCGATGACGATGCGGTTATGATCTACGACAATATCACCGAAACAGACCCT
CTTTTGCTGGTTTTGTCTGGTCCCACAAGCTCTGGGAAAAAGGCTTCATTGATTGCAGCA
TGTGCAGAACTCGATTTGTTTGTGTTCAAGTTGAACGCGACGACGCGACGGACCCAGAAG
GAGCTCATGTCGGCATTACAAGGACTAGGAGGATCTCAGCTCGTCAATCACAAACAGAAA
TCGTGCATCATTCTGATTGAGGACGTTGATGTGCTGTATGAAGATGAAAAGGGGTTCTGG
AGTGTGCTGGAAAAGGTTCTGGAGAAGAGCAAGGTGCCTGTGGTGGTCACCACAAGTGAT
GTCACCATCGAGCGTGAGTTTCCACCTAGTTTTGAAGGCCATGTTGTTTGGGAGATTTTC
GAGAGACTCGATACTGAGCTAGTCGACTCTTCAGCCCCAGTCCAAGGTATCAAGTCATGT
GAATCGGCTGAACCCCCTTCGTCTCCGCCTGCGAGAAATGTCACACCTCAGATTGCTGTA
TCCAGAGGAATCCTTCCTACCTATCTCTCTCTGTTGTGTCTGTGTGAAGGCTACGAGGTA
TCTACAGCTGACATTGTTCAGTTACTGAGCAGGTATTCACACGATGTCCGTCAGACAATC
AACCATCTGCAGTTGTGGTGCCAGATGGGTGTCGGTGATCCTCTGGGAGGTTTCAACTGG
GTAATTCCAATAAGTGAGGGTCAGGGAAAGAGAGTAGTTAGTGGAGATATGTTTGTGGGC
GTTGAACGAGGTGAGGTGAATGAGAAATCGGCTTCTGAAGAGTCACATAACACAATCCAC
TCCCTCCTAGAAACCTACGACAATGCCAGCATCTACGACATTTACTCCAACAGCTTTCAC
AGTGAACTTAACCAGACCATGTCGTCTGATGAGCATTCTGCACTTGCACATGATACTCCC
TTGGGTTGGCGGTGTCTCGAAGAAGACTCTATTGGGGAGTCTGATGCTCTGGAGTGGGAG
TTGGTTGATATGATGGAGGGGCTGAGTTTGGGAGATAAGACTCGAGATGGTAAGGTGGCT
ACCCTAAACAGCTATGCAGACCGGGTGGGGCTAAAGAATCTGCTGTTTGACGACATGATC
TACTATTCGCAGATCAACACCGTGTCTATGGCCACGACCAGGGCCCAGATCCTGCCCTAT
CTCCGAAGCATGGCTCAGGCGGACTTGTTTTACCAGAACCAGTTTGAGATACAACAGGCT
CAGCTCACTGGCCGCAAAAGTCGGCGAAGCATGGCTGCTATGGGCATTAGCATTCCTGTG
ACGCATCTGGAGTGGGATCTGGAGGGCATAATGGACACGAAAATGAACATTGATGGCTTG
TACGATAAATAGCATTGCATATAGAAATTGTTATTACAGTATGTACCTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22154g_CDS-001

Protein length: 804 aa.
Product: Conserved hypothetical protein

>YALI0D22154g_CDS-001 MMVQGRQTSLNSLWGIPEPVPHDPPLAAVAEIAQPTQTNQESHPHHPGKLMFALPSNVLQ
QLETDKQHQSRDTDRVAVPPPREKLKLTFKVAPDQLRLIADHKPLPKKVVHPFFQKKQKK
QSHVTEKTMTQPATQSVQAQKQSHVVQSIGPVSRAPKKPPPSAWFGVKKEKKKLTTPFPN
HTMFHVIPDSHVTNAPESQRLSFQKRYSRELGASHRLTKTKKGAIDLKLPMVSFKSKTPS
LHLPNRHVLSSDGILQLSREICGDLTSNSAIQSLLSRVTTLSAFDTADRETQMWVDKYRP
RSRHELVGSSKHVSNIVSWLKIRLSRRSCLVKSPHATPSSGFIVDDDAVMIYDNITETDP
LLLVLSGPTSSGKKASLIAACAELDLFVFKLNATTRRTQKELMSALQGLGGSQLVNHKQK
SCIILIEDVDVLYEDEKGFWSVLEKVLEKSKVPVVVTTSDVTIEREFPPSFEGHVVWEIF
ERLDTELVDSSAPVQGIKSCESAEPPSSPPARNVTPQIAVSRGILPTYLSLLCLCEGYEV
STADIVQLLSRYSHDVRQTINHLQLWCQMGVGDPLGGFNWVIPISEGQGKRVVSGDMFVG
VERGEVNEKSASEESHNTIHSLLETYDNASIYDIYSNSFHSELNQTMSSDEHSALAHDTP
LGWRCLEEDSIGESDALEWELVDMMEGLSLGDKTRDGKVATLNSYADRVGLKNLLFDDMI
YYSQINTVSMATTRAQILPYLRSMAQADLFYQNQFEIQQAQLTGRKSRRSMAAMGISIPV
THLEWDLEGIMDTKMNIDGLYDK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG