YALI0D22066g

Overview

Description similar to uniprot|P35182 Saccharomyces cerevisiae YDL006w PTC1 protein serine/threonine phosphatase 2c
Locus type CDS
Locus tag YALI0D22066g

Location

Species Yarrowia lipolytica Positions 2801676..2803029
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1354 (nuc.)
Previous locus YALI0D22044g Next locus YALI0D22088g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D22066g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D22066gYALI0D22066g_mRNA-001YALI0D22066g_CDS-001

Nucleotide sequence

 

>YALI0D22066g
ATGCTCAAGCTATTTCGACGAAACAGTAAAGATGAAGCCAAAGGCCATCCGATGCTGGCC
AACAACAACGGGCTGCCTGTGACCGACTCGCCACTGTCATCGTTTGCTGTGGGCGTTACG
GAGGACAAAAACTCGCGGTGTAGACGGACCATGGAGGATTATCATGTGGCTGCACACAAC
ATTTGCGGCACGCCCGATTCGGGGCTGTTTGCAGTATTTGACGGACATGCGGGCAAACAA
GCGGCTGAGTACTGCGCAACGGCAGTTGTCAGTGAGGTGGAAAGTCTGATTATGGAGTCT
GAGGGATTCAAAAGCGAAGACTCTGCAACCGAAGACCCTGAAGTCGTGCAGGAGGAGGGG
CTGGAGCACCAGGACAATGACAAGAGCTCGAAGACTGTGCCAGAGCTGCTTAATCTTGCC
TTCATGGCCATTGACCGGTCAATTGAGCAGAAGAACCTGAATTCCGGATGCACAGCAGCA
GTGGCTCTGTTGAGATGGGAGGATTCTCGAGGAAAGCCCGTGACGGTGTCTTCTGATCAC
TCACCCAAGGACTACACTCCCGTGTTTCCCCGTGCTCCATTGTCCGAGTGCAAGCGCAAG
CTGTACACTGCCAACGTGGGAGACACTCGGTTGATTTTGTGTCGAGCAGGCAAGGCCCTT
AGGCTGAGCTACGATCACAAGGGCACCGATCTCCATGAGTCTAAACGAGTCACCAACAAC
GGCGGAATGATGATCAGCAATCGGGTCAACGGAATGCTTGCTGTTACCCGTGCTCTGGGA
GACACGTATTTGAAGCAGTTTATTATTGGTAACCCATACACGACCGAGACGGAAATCATT
GCTGATGACGAGTTTCTGATTGTGGCTTGTGACGGACTGTGGGACGTTTGTGATGATCAG
AAGGCTTGTGATCTGGTGAGTGGACTAGAAGATCCTGTTGAGGGAAGCCGAATACTGGTG
GAGTTTGCTCTGGAGAACTTTAGCACAGATAATTTGACTGTGATGGTGGTGAAATTGCGA
TAAGTGGCAAAGGCAGGGTGACGAAATAGCTGTGTTTGAAGCGCATGTCGGACAGCCTCC
TCCGAGCTGTGTTCTTTTGAGGCTATCCTAGCAGTTTTTCTGAAAGCTGCCTGTATTTGT
CTAACTGTGACCAACCATCAGGTCAGCTTCATCTGACTTCCTTGTCTGAGGTACAGCTTC
AATCATACAACACAAAAGCTTCTGTTTCCATTCTTCAAGTCTTGCCCACTTGTTGATGGT
ATTCTTCGCACCTTTCATGCTCCTCGTTGGACCGAAAATGCTCCCCTTCATCACCGGAAC
CTGTATAGCCAATACACTAAGTTATTTGACTGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D22066g_CDS-001

Protein length: 341 aa.
Product: Type 2C protein phosphatase (PP2C), putative

>YALI0D22066g_CDS-001 MLKLFRRNSKDEAKGHPMLANNNGLPVTDSPLSSFAVGVTEDKNSRCRRTMEDYHVAAHN
ICGTPDSGLFAVFDGHAGKQAAEYCATAVVSEVESLIMESEGFKSEDSATEDPEVVQEEG
LEHQDNDKSSKTVPELLNLAFMAIDRSIEQKNLNSGCTAAVALLRWEDSRGKPVTVSSDH
SPKDYTPVFPRAPLSECKRKLYTANVGDTRLILCRAGKALRLSYDHKGTDLHESKRVTNN
GGMMISNRVNGMLAVTRALGDTYLKQFIIGNPYTTETEIIADDEFLIVACDGLWDVCDDQ
KACDLVSGLEDPVEGSRILVEFALENFSTDNLTVMVVKLR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG