YALI0D21530g - IMD4

Overview

Description uniprot|Q6C897 Yarrowia lipolytica YALI0D21530g IMD4 IMP dehydrogenase
Locus type CDS
Gene name IMD4
Locus tag YALI0D21530g

Location

Species Yarrowia lipolytica Positions 2720551..2722387
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1837 (nuc.)
Previous locus YALI0D21494g Next locus YALI0D21538g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D21530g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D21530gYALI0D21530g_mRNA-001YALI0D21530g_CDS-001

Nucleotide sequence

 

>YALI0D21530g
ATGACCCAGACTTTCAAGGACCCCAAGGATGCCCAGGCTTTCCTCTCCACCTACAAACAG
AAGGACGGTCTCGATGTCCACTCTCTGATGGACTCCTCTGTGCGAGGAGGTCTCACTTAC
AACGATTTCCTCATGCTGCCCGGCAAGATTGATTTCCCCTCTCACGAGGTGTCGTTGGAG
ACCAAGCTGACCAAGAAGATCACCCTCAAGGCTCCCCTTGTGTCTTCTCCCATGGACACC
GTCACCGAGTCCGAGATGGCCATCCACATGGCTCTGCTGGGTGGTATTGGTATCATCCAC
CACAACTGCTCTGCCGACGAGCAAGCCGAGATGGTCCGAAAGGTCAAGAAGTACGAGAAC
GGTTTCATTGCCGACCCCGTTGTTGTCTCCCCCAAGCACACCGTCAAGGAGGTGTTTGCT
CTCAAGGCCAAGCTTGGCTTCGCTGGCTTCCCCGTCACTGGTGAGTATCCGACACTGGCA
GATCTTCCCTTGCTATAGTGATGATCTTACAACTTTCGTTCTACCGAATGACTTAACCGT
CTTGGGGAGATGTTTTATTTTATACCTGACTCTTTTAGTGCCACAAGCGCTTTTTTTGCC
ACCGTGAAACCAAACTAACTCAGAAACCGGATGCATGTCTGGAAAGCTCGTGGGTATCAT
CACCTCTCGAGACATTCAGTTCCTCGACCTCGACGACACCCCCGTCGGTGAGGTCATGAC
CCCCGGTTCGGAGCTCGTTACCGCCCCCAAGACCATCGGTCTGTCTGCCGCCAACGACCT
GCTCAAGAAGTCCAAGAAGGGTAAGCTGCCCATTGTCGACAAGGAGGGCAACCTCGTTGC
TCTTCTGTCTCTGACCGATCTGCAGAAGAACCACGACTACCCCAACTCCTCCAAGTCTCC
TGAGACCAAGCAGCTGCTCTGTGGCGCCGCCATTGGTACCCGGCCTGACGACCGAGAGCG
ACTCGAGAAGCTTGTTGCCGCTGGCCTCGACGTTGTCATCCTCGACTCGTCTCAGGGTAA
CTCCATCTTCCAGATCGAGATGATCCAGTGGATCAAGAAGACCTTCCCCGACCTGCAGGT
TGTTGCTGGTAACGTTGTTACCCGAGAGCAGGCTGCCTCTCTCATCGAGGCTGGTGCTGA
TGGTCTCCGAATCGGAATGGGCTCCGGCTCCATCTGTATCACCCAGGAGGTTATGGCTGT
CGGCCGACCTCAGGGTACCGCTGTCTACTCGGTGACCCAGTTCGCCAACCAGTTTGGCGT
CCCCTGCATTGCCGACGGTGGTGTCCAGAACATTGGCCACATCACCAAGGCCGTTGCTCT
TGGTGCCTCTGTCGTCATGATGGGTGGTCTGCTTGCTGGTACTCTCGAGTCTCCCGGCCA
GTACTTTTACCGAGACGGCCAGCGACTCAAGTCCTACCGAGGCATGGGCTCCATTGAGGC
CATGGAGAAGCAGGATAACAACGACAACGCCGCCACCTCCCGATACTTCTCCGAGTCCGA
CTCCGTGCTCGTTGCCCAGGGTGTGTCTGGTTCCGTCATTGACCGTGGTTCCATCACCAA
GTTCATTCCCTACCTGACTGCTGGTCTCCAGCACGGTCTGCAGGACATTGGTGTCCGATC
TGTTGCCGAGCTCCGAGAGAAGGTTGACAATGGAGACGTTCGATTCGAGTACCGAACCGC
TTCTGCCCAGCTCGAGGGTGGTGTCCACTCCCTGCACTCTTACGAGAAGCGACTCCACAA
CTAAGTGTTGTGAATGTTGTATAACACGTAAAACATCTAGTCACTGCCATGTATATGTAA
ACATACTAGAATTGAATATTATTGATTTGAGCAACTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D21530g_CDS-001

Protein length: 527 aa.
Product: IMP dehydrogenase
Gene: IMD4

>YALI0D21530g_CDS-001 MTQTFKDPKDAQAFLSTYKQKDGLDVHSLMDSSVRGGLTYNDFLMLPGKIDFPSHEVSLE
TKLTKKITLKAPLVSSPMDTVTESEMAIHMALLGGIGIIHHNCSADEQAEMVRKVKKYEN
GFIADPVVVSPKHTVKEVFALKAKLGFAGFPVTETGCMSGKLVGIITSRDIQFLDLDDTP
VGEVMTPGSELVTAPKTIGLSAANDLLKKSKKGKLPIVDKEGNLVALLSLTDLQKNHDYP
NSSKSPETKQLLCGAAIGTRPDDRERLEKLVAAGLDVVILDSSQGNSIFQIEMIQWIKKT
FPDLQVVAGNVVTREQAASLIEAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYSVTQF
ANQFGVPCIADGGVQNIGHITKAVALGASVVMMGGLLAGTLESPGQYFYRDGQRLKSYRG
MGSIEAMEKQDNNDNAATSRYFSESDSVLVAQGVSGSVIDRGSITKFIPYLTAGLQHGLQ
DIGVRSVAELREKVDNGDVRFEYRTASAQLEGGVHSLHSYEKRLHN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG