YALI0D20966g

Overview

Description similar to uniprot|P38615 Saccharomyces cerevisiae YMR139W (ohnolog of YDL079C) MDS1 ser/thr protein kinase
Locus type CDS
Locus tag YALI0D20966g

Location

Species Yarrowia lipolytica Positions 2656988..2658795
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1808 (nuc.)
Previous locus YALI0D20944g Next locus YALI0D21010g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20966g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20966gYALI0D20966g_mRNA-001YALI0D20966g_CDS-001

Nucleotide sequence

 

>YALI0D20966g
ATGTCCGAAATCGTGACCGAGTCCGTGCGAGACGGAAAAACCGGCGAACAGCGCCAATTA
ACCTATACCCAGTGCAAGGTCGTGGGATCCGGCTCGTTTGGAGTCGTGTTCCAGACCAAG
CTGCTGCCCAGCAACGAGGACGCGGCCATCAAGCGGGTTCTGCTGGACAAGAGGTTCAAG
GTGAGTAAGGAAGGAACGAATGGCAGCAGGGACCAACGGCGTGACTGTTGGCAGGAATGA
CTGGCAGTGGGAGGCGACTGACCGTCGTCGGAGCGGACAATGACGGGCCGAATGGAAGTC
TGCTACGCGATTGATTGAATGATGGAATGATGCCGACTCTGATTTACCACCAGACTGTCT
TGTGTATGGTGCGCGTCAAGAAGGATTAAAGGCGATGGATGTATGCCATGGATGATTGCG
ATTCGTTGTGTCGTTGTTGCACTCGCACCACACATGGCGTGTTCCACCACAAGTCGACAG
AGGTGAAGTGTGATGGAGACACGACAGCATCTGCTGGTATCGACAGCATCATTGACCACA
ACGGGTGACAGCCGGAGGAATGATGTACTCCACTCGTGCTGCCCATTTGAACTTGATCAC
TGTTGACGGTATGACACGCTGTTTCCATCCCACCCATTCCGGAAGACACGCAATCAGACA
CATGTCTGCACACATCTCCACACAACAGTAATACTAACACAGAACCGAGAACTGGAAATC
ATGCGACAGGTGTCGCACCCCAACATTGTGGAGCTCAAGGCCTTCTTCCACTCCAACGCT
GAGAAGGACGACGTCTACCTCAACCTGGTGCTGGAGTACGTGCCCGAAACCGTGTACCGG
GCACTGCGACACTTCTCCAAGGCCCGGCTCTCCATGCCCAACATTGAGGTCAAGCTGTAC
ACCTACCAGCTGTTCCGATCGCTGGCCTACATCCACAGCCTGGGCATCTGCCACCGAGAC
ATTAAGCCCCAAAACCTGCTGCTGGACCCCGCTACGGGCATTCTCAAGCTGTGCGATTTT
GGTTCGGCCAAGATTCTCGTTCCCGGTGAGCCCAACGTGTCGTACATCTGCTCACGGTAC
TACCGAGCCCCCGAGCTGATATTCGGCGCCCAGAACTACACCACCAAGATTGATGTGTGG
TCTGGCGGCTGCGTCATGGCCGAGCTCATGCTGGGCCAGCCCCTCTTTCCCGGTGAGTCC
GGCATTGACCAGCTGGTGGAGATCATCAAGGTGCTGGGCACCCCCTCGCGCGAGCAGATT
CGAACCATGAACCCCAACTACATGGAGCACCGGTTCCCCCAGATAAAGCCCCATCCCTTT
TCGCGGGTGTTCAAGCGAGGCCCACCCGACGCCATCGAGCTCATCACCCCACTGCTCGAG
TACAGCCCCGGACAGCGACTGTCTGCCATCGAGGCGCTCGTCCACCCTTACTTTGACGAG
CTGCGGGACCCCGAGACGGTGCTGCCTGACTCTCGAAACCCCAACAATGCGGTGCGTCAA
CTGCCCGCTCTGTTTAACTTCACACGACACGAGTTGTCGATTGCGCCGGAGCTCAACCAG
AAGCTGGTGCCGGCCCATGCCCGGGAGGCGCTGGGCGTGGATCTCGACAACTTTGTGCCT
CTGACCGTGCAGGAGATGGCCGCAAACCTGTCATAACTGTCACCGGTCCATGATACAAAT
GTATGAATAGAGCCGAGTAAGGTACTTGGCAGGGGAGGATAATATATGTTTGACTACGAC
TTGAGCTGGTCCGACAAGGCTCGACTAGTAGTGATTCGCTGATGTAGAGTAAAATGTTTG
ATATTGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20966g_CDS-001

Protein length: 378 aa.
Product: Protein kinase, putative

>YALI0D20966g_CDS-001 MSEIVTESVRDGKTGEQRQLTYTQCKVVGSGSFGVVFQTKLLPSNEDAAIKRVLLDKRFK
NRELEIMRQVSHPNIVELKAFFHSNAEKDDVYLNLVLEYVPETVYRALRHFSKARLSMPN
IEVKLYTYQLFRSLAYIHSLGICHRDIKPQNLLLDPATGILKLCDFGSAKILVPGEPNVS
YICSRYYRAPELIFGAQNYTTKIDVWSGGCVMAELMLGQPLFPGESGIDQLVEIIKVLGT
PSREQIRTMNPNYMEHRFPQIKPHPFSRVFKRGPPDAIELITPLLEYSPGQRLSAIEALV
HPYFDELRDPETVLPDSRNPNNAVRQLPALFNFTRHELSIAPELNQKLVPAHAREALGVD
LDNFVPLTVQEMAANLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG