YALI0D20944g

Overview

Description similar to uniprot|Q12016 Saccharomyces cerevisiae YOL129W VPS68 Vacuolar membrane Conserved protein of unknown function involved in vacuolar protein sorting
Locus type CDS
Locus tag YALI0D20944g

Location

Species Yarrowia lipolytica Positions 2654877..2656626
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1750 (nuc.)
Previous locus YALI0D20922g Next locus YALI0D20966g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D20944g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D20944gYALI0D20944g_mRNA-001YALI0D20944g_CDS-001

Nucleotide sequence

 

>YALI0D20944g
ATGTGAGTATGACGAGCCAAGAAGATGGTTCCAGGCATCAGGAGACAGCTGATTATGCCA
TCCAACGACATATCGACAGCCACATGAACCATGTCGCAGCCATTACAAGACAATAACATG
TCGTGAACAATGCCCGGAGTTAGTGTATGATATGAGATTGACGAGACAAGTTCATGACAG
CGGATGAATGATGGAGCTCGGTCGTCAACAATGACTCCGATCTTGTATATCCTGTACTCC
ATGTTTTGCAACAAGATGAAGAGTACACAGGATAGGTCTAGAGTATGAGGCGAGGGATAG
GACAGGTCGTCTACACTATACCTGGTGGCGGTGACCGTGACCCTGAGAAGCAACAAAGAC
GTCGTCCATTCAATCTGTGTGAACAGCAGCAGATGGTTTCTGACTTTCACAATTGCCACA
CACCGCTTGCTGCATGTCTCTGCTTCATGTCTCCATCCGTTGGCTGTGTCTTCACCCTTG
TCCAATCTCTTGGATGAAGTCATTCGTTGCCAGGGGCTGGTCATGTCATGCCCTGAGATT
CCCATATGGATTCATTCAGAGTGTGACGGCCGTTTCCGATACCAATGAAGGCCATTTTTA
ACACGGATAGTAGTTATCCGGCCAACGTCCCTTAAAGACGTCGGTTTTCTCGTTATCATA
CTAACCTAGGTCCCTCTTTCGCATCGCCATTCCCGGCTTCAAGCTCCCCCCATCATCCCT
ACGGGCTGTCGGAGTCTACGCCTCCGGAGCCATCTTCTCGCTCGGCTTCTACGCCATGCT
GGATGCCGCGCTCTACTCCAGCCACAAAAACGGATCCACCGTCCACGTCCGTTTCTTCCC
CGACTGGCTGCCATTGCTGTTTTCGTGCATTGGAATGCTGGTGATTAACCTGGTGGAGAA
GGCCCGTCTGCAATCGGCGCTCACCGGCGGATCGTCCTTCTCGTCTGGAGAAGACTGGCA
GGCCAAGGTGGTGCTGTTCCTGGGCTTTGCATTCCTGGCCGGCGGGATGGCGTCCTCGAT
TGCCGTGCTTGTGCTCAAGTACGCCCTGCCAGGCTATTCGATGCCCACTCTGGGTATGGG
TGTGGCCAACGTGATTTGCAACGCCTCCGTCATGGTTTCCTGCGTACTTCTGTGGGTTGC
GCAGAACATTGAGGACGAGTACTCATACTCTTTGTCGTTGTAGGCGGAGGAAAACGGAAT
CACAAGACCAAAGGTCTCTAACGAGTAATATATGATATGATTATGAGTGTAGGGGCAAAA
GATGCACACTGCAGGTCAATGTTTTTGAAGGGACTACGAAGGAGAAGAAGGAGGTGTACA
GTCCCACGAGTACATACCATTCAATAGTTGCAACACACAGTACATAAAGTATGTCCTTGT
ACTAGTATGAGCACGTGAATTCCTCTGTTCTGTCTCCACAGACCATGTCCAGATCGTCTG
TCTACAGAAGCCCGATATCATGTCAGAAGAGCCCTTAGCCCCTGTCAAACGTCATCGGTT
TTCGCAGCAGCATTCACATGCGCACGTTGCATGGCTTGGAACAAGGCAAGGGTCGGAAAT
GAGCCGGAGACAGCTGAAAAATTAGTCCGAATAATATCGGTCAGCGGCCAAAGAATGCCC
CTTGCTACGGCCATGATTTCGCAGCGTGCTAGCGTGATAATACTGAATCTAGCCGCGTGT
GAAAAGGTGTACATACTGTCCAGTGTATGACATTGTTCTACTGCATTTAGTTTAACTATT
CTGTTTATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D20944g_CDS-001

Protein length: 172 aa.
Product: Vacuolar membrane Conserved protein of unknown function, putative

>YALI0D20944g_CDS-001 MSLFRIAIPGFKLPPSSLRAVGVYASGAIFSLGFYAMLDAALYSSHKNGSTVHVRFFPDW
LPLLFSCIGMLVINLVEKARLQSALTGGSSFSSGEDWQAKVVLFLGFAFLAGGMASSIAV
LVLKYALPGYSMPTLGMGVANVICNASVMVSCVLLWVAQNIEDEYSYSLSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG