YALI0D12400g - PGK1

Overview

Description uniprot|P29407 Yarrowia lipolytica YALI0D12400g PGK1 Phosphoglycerate kinase
Locus type CDS
Gene name PGK1
Locus tag YALI0D12400g

Location

Species Yarrowia lipolytica Positions 1540753..1542569
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1817 (nuc.)
Previous locus YALI0D12386g Next locus YALI0D12408g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D12400g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D12400gYALI0D12400g_mRNA-001YALI0D12400g_CDS-001

Nucleotide sequence

 

>YALI0D12400g
TTCACGATATTTCGTTTATTCAGGTGAGTACCCACGAAACGCAGCCAATTGGTTCCAATT
GAGTCCTAGGGAGGTGACACAAACACACAGCGACACAGAGACGGACACACAGGGCTCCGT
CTGTGGTGAGAGATACACTAGTAACCACTACTGGGGCGCCCAATGCCGTGAGCGAGAGTG
TCAGCAAAGTAGTATATGGAGCTATGCACAAATGCTAAGGCAAATTGGGATGCACGGTGT
GTCAATGGGATAACGCAAGTTGTGTTGCTACGCCACTGGTGACTCTCTTGTCTGGTGATG
TTGTCTTGGTGCAGTGTTGGGGTTGAGCTCTTGTGCTGTTGGGTCCGTCTGTGTGGATGA
TTTGACCTATTTCTGTGTCAAGTCCACATACAAACAGGATCTATCAATGCCACGGACCAG
TCACAACACTGCCACGTCCGCCTCTGCGACCTTCTACCTCCTCTTCGACTGCACATGTTC
CCTCATTCTAACTAACTCAGAATGTCTCTTACCAACAAGCTCTCCATCAAGGATCTCGAT
CTCAAGAACAAGCGAGTCTTCATCCGAGTCGACTTTAACGTTCCTCTCGATGGCACCACC
ATCACCAACAACCAGCGAATTGTTGCTGCCCTGCCCTCCATCAAGTATGCCATTGATCAG
GGTGCCAAGGCTGTGATCCTTGCTTCTCATCTCGGCCGGCCCAACGGCCAGCGAGTCGAG
AAGTACTCTCTCAAGCCCGTCCAGGCCGAGCTTTCAAAGCTCCTTGGCAAGCCCGTCACC
TTCCTTGACGACTGCGTCGGCCCCAAGGTTGAGGAGGAGGTCTCCAAGGCCAAGGACGGT
GAGGTCATTCTCCTCGAGAACCTGCGATTCCACCCCGAGGAGGAGGGATCCCACAAGGAC
GCCGACGGCAAGAAGATCAAGGCTGACCCCGCCAAGGTTGAGGAGTTCCGAAAGTCTCTG
ACTTCTCTCGCCGATGTCTACGTCAACGACGCTTTCGGAACCGCCCACCGAGCCCACTCC
TCCATGGTCGGCATTGAGCTTCCCCAGCGAGCCGCTGGTTTCCTTGTCGCCAAGGAGCTC
GAGTTCTTCGCCAAGGCTCTGGAGCACCCCGAGCGACCCTTCCTTGCCATCCTTGGTGGT
GCCAAGGTCTCCGACAAGATCCAGCTCATCGACAACCTACTTGACAAGGTCAACGCCCTG
ATCATTGGTGGTGGTATGGCTTTCACCTTCAAGAAGACCCTTGAGAACGTCAAGATTGGA
AACTCTCTCTTCGACGAGGATGGATCCAAGATTGTCGCCGGCCTCGTTGAGAAGGCCAAG
AAGAACAACGTCAAGCTTGTCTTCCCCGTCGACTACGTCACCGCCGACAAGTTCTCCAAG
GATGCCAAGGTTGGCCACGCAACCGACGCTGAGGGTATCCCCGACGGATGGCAGGGTCTG
GACTGTGGTCCCAAGTCTATCGAGGAGTTCCAGAAGGTCATTGGCGAGTCCAAGACCATC
CTCTGGAACGGACCCCCCGGTGTCTTTGAGTTCGACAACTTCGCCAAGGGTACCAAGGCT
GTGCTTGACGCCTGTGTCAAGGCCGTTGACAACGGTGCTACCGTGATCATTGGTGGTGGA
GATACCGCCACTGTCGCCAAGAAGTACGGTGCCGAGGACAAGCTCTCCCATGTTTCCACT
GGAGGAGGAGCTTCTCTTGAGCTTCTCGAGGGTAAGACCCTTCCCGGTGTCGCTGCTCTC
TCCGAGAAGAAGTAAGCTATTTACAGCATGTGTAATGAGGAATATAACGTTGATTGAATT
GTTTGTGAAAAATGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D12400g_CDS-001

Protein length: 418 aa.
Product: Phosphoglycerate kinase
Gene: PGK1

>YALI0D12400g_CDS-001 MSLTNKLSIKDLDLKNKRVFIRVDFNVPLDGTTITNNQRIVAALPSIKYAIDQGAKAVIL
ASHLGRPNGQRVEKYSLKPVQAELSKLLGKPVTFLDDCVGPKVEEEVSKAKDGEVILLEN
LRFHPEEEGSHKDADGKKIKADPAKVEEFRKSLTSLADVYVNDAFGTAHRAHSSMVGIEL
PQRAAGFLVAKELEFFAKALEHPERPFLAILGGAKVSDKIQLIDNLLDKVNALIIGGGMA
FTFKKTLENVKIGNSLFDEDGSKIVAGLVEKAKKNNVKLVFPVDYVTADKFSKDAKVGHA
TDAEGIPDGWQGLDCGPKSIEEFQKVIGESKTILWNGPPGVFEFDNFAKGTKAVLDACVK
AVDNGATVIIGGGDTATVAKKYGAEDKLSHVSTGGGASLELLEGKTLPGVAALSEKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG