YALI0D08162g

Overview

Description highly similar to uniprot|P33723 Neurospora crassa GTP-binding protein ypt1
Locus type CDS
Locus tag YALI0D08162g

Location

Species Yarrowia lipolytica Positions 1041667..1042973
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1307 (nuc.)
Previous locus YALI0D08140g Next locus YALI0D08184g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D08162g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D08162gYALI0D08162g_mRNA-001YALI0D08162g_CDS-001

Nucleotide sequence

 

>YALI0D08162g
ATGAATACCGAGTGGTGAGTTTTCTGGCAAGGCTGGGACAGCTTTGAATGACAAGCACGG
ATGCGGGTGCGACAAACAGCTCTATTTATACCCCACGACTTGCGGCTTGTGGCTTTGTTT
ATTTATCTTGTGCTGTTTACCGCGCAACCGGAGTTACGTGTTTTGTGAAGGCATGGTTGG
GCAACGCAGCTGATAAGTGCCAGCGAGGAGCGACTGGAGAGGCCTATTTTTGTATGTTGG
TGGACAGTGTGATGTTGTGGTTGCTGTTCCGAAGTTGAAACAAGTACTAACCATTAGAGT
AGAAAAAAGGACCTGCGACATGTTGGGTTGTGTGGTGGGGTGGAATCACACATTGAGACG
ACAACCACTCGGATGTGATTTGGAAGACACCAGCAATGTTGATGGATGGCAACGATATCT
GATTTTTTGAACGATACCTTCTTGTGGCTCACGTGGCAGGGTGTTTACTGTAATGACACT
GGTGGCGTTGAGATAGAAGGAGGAATGCTTTTCTGGATGGATCATGTCATATGATTGCCG
ATGGAGCGCGACAAAAAGCCAATGATATCACCTCCCCATTTTGCAATACTAACTACAGAT
ACGACTACCTCTTCAAGCTGCTTCTCATTGGAGATTCTGGTGTTGGCAAGTCTTGTCTTC
TGCTTCGATTCGCCGACGATACCTACACTGACTCTTACATTTCCACTATCGGTGTTGATT
TTAAGATCAGAACTTTAGAGCTGGAAGGAAAGACCGTCAAGCTGCAGATTGTGAGTATAT
CTACTTTCGATAATGTGACCAAGAGACCGAATACTAACCCAGTGGGATACTGCCGGACAG
GAGCGTTTCCGAACCATCACTTCTTCATACTACCGAGGAGCCCACGGTATCATTGTCGTC
TACGATGTGACTGACCAGGACACATTCAACAACGTCAAGACTTGGTTCCACGAGATTGAC
CGATACGCCACCGAGGGCGTCAACAAGCTGCTTGTGGGTAACAAGTCCGATATCACCGAC
AAGAAGGTCGTAGAGTACACTGTGGCCAAGGAGTTTGCCGACTCTCTGGGCATCCCTTTC
CTGGAGACCTCGGCTAAGAACGCCACCAACGTTGAGCAGGCATTTTTGACCATGGCACGT
CAGATCAAGGAGCGAATGGGCGGAGCTGCCGAGAACACCGCCGCCAAGGCCAATGTCAAC
CTCCGAGGCCAGAATGTCTCTCAAGGTTCCAGCAGCTCTTGCTGTTAACTAGTCAATTAA
TGGGTTGAAATGTAGTAAATGGACTGAATGTGATGATACTTGTTAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D08162g_CDS-001

Protein length: 203 aa.
Product: GTP-binding protein, putative

>YALI0D08162g_CDS-001 MNTEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFNNVKTWFHEIDRYATEGVNKLLVG
NKSDITDKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMGGAAENT
AAKANVNLRGQNVSQGSSSSCC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG