YALI0D07890g

Overview

Description highly similar to uniprot|Q8X0I8 Neurospora crassa Probable E2 ubiquitin-conjugating enzyme
Locus type CDS
Locus tag YALI0D07890g

Location

Species Yarrowia lipolytica Positions 1013261..1014069
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 809 (nuc.)
Previous locus YALI0D07876g Next locus YALI0D07898g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07890g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07890gYALI0D07890g_mRNA-001YALI0D07890g_CDS-001

Nucleotide sequence

 

>YALI0D07890g
ATGTTGAAAATCTGGAGCATGAAGGAGAAGCAGGCGGCCGAGGGCGGCAGTGCCAAGAAG
AAGGTGACTGCTGCTCAGTTGCGGGTCCAGAAGGATCTGTCTGAGCTGTCGCTTCCTTCC
ACCATGAAGACGCATTTCCCCTCGGCAGAGGACATTATGAACTTTGAGCTGACGGTGCGG
CCCGACGAGGGCTTCTACCAGGGTGGCGAGTTCCGGTTCTCGTTCTACGTCAACCCCAAC
TTTCCCCACGAGCCCCCCAAGGTCAAGTGTCTGCAGAAGGTGTACCATCCCAACATTGAT
TTGGAGGGCAACGTATGCCTGAACATTCTGCGAGAAGACTGGAAGCCCGTTCTTAGTTTG
TGAGTACGACGCATTGCATGTAAAATCACAGATCACCCATCCAAACATAGACACACTAAC
TAACTCAGAAATGCAGTCATGATCGGTCTTCAGTACCTGTTTTTGGAACCCAATGCATCA
GATCCGTTGAATAAGGGTGAGTATTATCTTTCTACGCGTGACCCACGGCCGCCGTTACTA
ACACAGATGCTGCACATCAGATGACAGCAAACAGAGAGGAGTTCAAGAGAAACGTCAAGC
ATTCCATGGCCGGAGGCTCCGTTGCGGGAGAGCGGTTCGACTGCGTTCTCATCAAATAAG
GAGTCCGGATGTGGATCTCTGTATACATATCGGTGTTGGCGCGGTCAGAAAGCGCTTCTG
CCACTTTCTTCTTCGTCATTGGCACATTTCGTCGTGGATTCGTCTTCGACAGCATATAAT
TAACTATTAAACTGATTTAACGGGTGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07890g_CDS-001

Protein length: 180 aa.
Product: E2 ubiquitin-conjugating enzyme, putative

>YALI0D07890g_CDS-001 MLKIWSMKEKQAAEGGSAKKKVTAAQLRVQKDLSELSLPSTMKTHFPSAEDIMNFELTVR
PDEGFYQGGEFRFSFYVNPNFPHEPPKVKCLQKVYHPNIDLEGNVCLNILREDWKPVLSL
NAVMIGLQYLFLEPNASDPLNKDAAHQMTANREEFKRNVKHSMAGGSVAGERFDCVLIK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG