YALI0D07810g

Overview

Description weakly similar to uniprot|Q8J0A3 Cryptococcus neoformans Calcineurin temperature suppressor Cts1
Locus type CDS
Locus tag YALI0D07810g

Location

Species Yarrowia lipolytica Positions 1004061..1006987
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 2927 (nuc.)
Previous locus YALI0D07788g Next locus YALI0D07832g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07810g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07810gYALI0D07810g_mRNA-001YALI0D07810g_CDS-001

Nucleotide sequence

 

>YALI0D07810g
AGAGGTCATTGAGCAGCAGCGATGGACGACCTTCTTGACTATGGCCTGTTGATTATTGTT
TTCGGCAAAGGAGTGAGTATTTGCAGGAAAGAGCGGTGTTTTTCGAGGCTCGAAGCAGTG
CTATTTTGGGACCTCCAAGTGAAATGAGAGCGCAGCAATGTGGATATAGTGAAGATGGTG
ATGATAATGTGAGATTACGACATGAGGGGTCATTATTCACAGGGGAAAGTGATCAAGACG
CGTGTGGAACGAATCTAGGAATCGCTCTTGTGTCTTACTTGATCGCAATGTTGCTCATAT
TGATATTCTGATCCCTTATTGAAACAGCATGAGCACCATTACGTGACTCCTTTCTTATGA
TACCTTCACATTGCGACGACTCCCCATCTGTGACATGTCTGAGCTAGCCAAAAAGGTGCC
CGCTCGTAACTTATCACATTCTTTATAGCTTGATGATGTCCGTTACTACGGCCACTCTCT
ACCGTGTGCTAACCCAGCGAAACCTGCCAAATCGACGTACCCTCGGCAAACAAAACCCAT
ACTGCATTGCGCGAATCGCCCACGAGGCCAAATCATCCCCTCCAGACATCAGAGGAGGCC
AAATTCCTAAATGGGATCACGAAGTGCGTTTCAACCTGAGAGACAACGCAGAACAAAAAC
AGCTGAAACTCACGGTGCTGGACAAGAATGACAGCAAGCCCGAGCTCATTGGCGACACGG
TGCTCGACCTTCAACCCGTCTTTGACTCCAACCCCAGAGATGGCTTTGACCAGTGGCATG
AACTCACATACAAGGGCAAGTATGCCGGAGAGGTCTACCTAGAGATGACTTTCTACCCTA
CAAAACCAAACATTCCCCCAAAGGTGGAGAGACAGAAGAAGAAGAAGAAGTCGAAGAAGA
AGAATTCCGCCAATACTGGTGCTGACCCCCTCATGCAGTCAACCATGTCAGCTATTCCTT
CAGACCTACCTCCAGGAATCGTACCTGCTGGAACCGGCTCGTTCAACGACCCCAGAGCAT
TTGATCAGTACGTTCCCCCGGGCTACGCAGGCCATGCTAGCGTCAACGCCTCCGGTCTGC
CTTCTCTGCCAAACCAGTCACTTCCTAACCACTCCATGCCAGCCCTTCCCTCTCAGGCGA
TGAACCATTCCGTCTACGGAGCAGGCCCAGGCCCAGGAACCCCGCCTCCTATGGCAAACT
CCGTGAACTCTTACCCCATGGGCCAGTCTATGACAGCTTCGCATTCAATGCATGCTCTGG
GACACAGCAGACCTCTGCCCGAAGCTGTTCCCGAGCGGTCTCTTCCGGACCCGCGGATGA
GCGACTCGAGACTCCCAGATCCCCGTATGAGTGACCCTAGACTTCCGACCATCCCGGATC
CAAGAATGGTAGCTCAGGATCCACGAATGGACCCTAGACTTGTAGGACAGGACCCCAGAA
CACCCACTCATCGATCTTCTGGTCCAGTTAATCTTCCCAGCGTGCCCACGACTCCTTCTC
CATACAGAGAACCGCTGTCGCACTCTCGATCTGCAGACCCCATCAGAAGACAAGGCAACA
GTCCGGTAGTGTCGTCTCCAAGATACACGCAAGGAGGTTACGCTAGCAACGGGTCTCCTC
TGCGACCGTCTTCTGCTGGCTACGATCAAAGCGCGTCTTCGTCGTATGGAAGACCGTCTT
CTGCAGGTATGGATATGCCTCCTACTTCTACAGCTGCCCGGTACGACATTCCCGAACCTC
TGCGACAATCGGGACACGGACGACGCTCTTGGGGAGCAGGAGATAGTTTTCCACAGGCCC
ACGATTCACGACACACTCCTCCTTTGCGAGTTAATCGGTCTCAGAATGGAATGAACGGCC
GAGACGACGATCTTGACTTGACTGTCAGCATGCTCAAAAACTCGTACGGAGGACGGTCAG
TTGGAGCTTCTCCTGCCCATGTCCCTTCAATCCCCACAACTTATGAACGAGATAGAGCTT
ATGATAGAGGTTTTGAAGCTGTTCCTGGACCTGCAGGACAAACCACGTACTCTCCTCGAG
GCTCCACGGGCTCATATTCTCAAGGGGGAGGTCTCAACAGCTCTGGATATTCGCCCCGAA
CGTCTACAAACAGTCACATGACATCCTCCACAAACACAATGTACTCTGATGATGATGGAG
GAGACAATCAGTACAAACGCTTCCTTAACCACAAGGCGCCTGCCCTTGATCTTCCCAAGA
TTCCTACGTCTCCTGCGCAGGGTCAGTATGGCTTCAGCGTCAAGAGAAAGCCCGTGGGGA
GTGGTGCATCCCCTGAGAAACCCTCTACTCCTCAGCCCGCTCAGGGTGATGTCATGTCGT
ACGCCATGCAGCGAAAGATGGCTTCTCTCTCTCTGGAGGGGGACATTCCGTTTTCTCCAG
ACTCGTACTCAAAGCCTAGCTCACAGCAGCACCCAGGCACTCATGCGGACAACCCCAATG
GGCTCTCCGGAGACGATATTCTAGATGTGTCTACGTATGCTCCTGAGCCTGCCAGAGGGC
CCACTAGACGTCTTCCTACAGTTCCTGCAGGCCAAGTGGACCCTGGACATGCGGGATACA
AGGGCGAAGGCCAGTGGGATATTTCCGACCAGCTCAACGCGAAGTATTCGGACTCTGTGT
TCCATGCAGTTACTCAGAAGAAGAAGGTGAGTCGACCTCCTCCTCCTCAGGAAATGTATC
GCAAGCCCCAGCTGCCTCCCAAGATTCCTCTCGGCATGACTCGAGATGAGTACTACGTAG
CCGAGCCGGAGTATGATGGCTACCAGGGCTATTAAGCCAACTCATTACACACACACACAC
ACACACACACACACACACACACACATTACACACTCAAGTGTCTCACATAACACGTGCTTT
ACACGTACTCATATTTGTATAGATAATCTACAGAACTTATTGTGTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07810g_CDS-001

Protein length: 783 aa.
Product: Conserved hypothetical protein

>YALI0D07810g_CDS-001 MDDLLDYGLLIIVFGKGRNLPNRRTLGKQNPYCIARIAHEAKSSPPDIRGGQIPKWDHEV
RFNLRDNAEQKQLKLTVLDKNDSKPELIGDTVLDLQPVFDSNPRDGFDQWHELTYKGKYA
GEVYLEMTFYPTKPNIPPKVERQKKKKKSKKKNSANTGADPLMQSTMSAIPSDLPPGIVP
AGTGSFNDPRAFDQYVPPGYAGHASVNASGLPSLPNQSLPNHSMPALPSQAMNHSVYGAG
PGPGTPPPMANSVNSYPMGQSMTASHSMHALGHSRPLPEAVPERSLPDPRMSDSRLPDPR
MSDPRLPTIPDPRMVAQDPRMDPRLVGQDPRTPTHRSSGPVNLPSVPTTPSPYREPLSHS
RSADPIRRQGNSPVVSSPRYTQGGYASNGSPLRPSSAGYDQSASSSYGRPSSAGMDMPPT
STAARYDIPEPLRQSGHGRRSWGAGDSFPQAHDSRHTPPLRVNRSQNGMNGRDDDLDLTV
SMLKNSYGGRSVGASPAHVPSIPTTYERDRAYDRGFEAVPGPAGQTTYSPRGSTGSYSQG
GGLNSSGYSPRTSTNSHMTSSTNTMYSDDDGGDNQYKRFLNHKAPALDLPKIPTSPAQGQ
YGFSVKRKPVGSGASPEKPSTPQPAQGDVMSYAMQRKMASLSLEGDIPFSPDSYSKPSSQ
QHPGTHADNPNGLSGDDILDVSTYAPEPARGPTRRLPTVPAGQVDPGHAGYKGEGQWDIS
DQLNAKYSDSVFHAVTQKKKVSRPPPPQEMYRKPQLPPKIPLGMTRDEYYVAEPEYDGYQ
GY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG