YALI0D07612g

Overview

Description similar to uniprot|P39969 Saccharomyces cerevisiae YER114C (ohnolog of YBL085W) BOI2 budding protein
Locus type CDS
Locus tag YALI0D07612g

Location

Species Yarrowia lipolytica Positions 982854..985269
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2416 (nuc.)
Previous locus YALI0D07590g Next locus YALI0D07634g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07612g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07612gYALI0D07612g_mRNA-001YALI0D07612g_CDS-001

Nucleotide sequence

 

>YALI0D07612g
ATGTCGGTCAATCCCGCACCCACGCCCTCGCACGAGGTCAAGACGGTGCTGATCGCCATC
CACGATTTCAACAACCGGTCGGAGGACGAGCTGACGTTTGTGTCCGGCGAGCAAATCCAG
GTGATTGAAAACGACTTTGAATTCAAAGACGGTTGGTACATTGGCAAGCGGCTCATCACG
GGCGCCACGGGCCTGTTTCCACGCGTCTTTGCGTCCACCGTGGACGAGCTCATGGACGCG
GACGTCCAGCCGGGCCAGCAGCTTCCTTCTTCGGGCCCCACAACTCCCGCAGGCTCGAAT
CCAAGCTCACGGGTCGTTTCGCAATCACAGCAATCGCCATCGGTCACAAAGACGCTCACA
GACATCGATGAGGTGCTTTCGGAGCTCAACAACCACACAAGCCAGCTGTCGGTGACCAAG
AAGGCGTCGGCCAACGGAGGCGAGCTGGACCCAGCACGCGTCATGTCGTGGACGCCGATA
CAGGTGGCAAGATGGTTCGAGAACCGGGGCTTTGAGCCGGCCATCCCCAAGCTCTTTGTC
GAACACAAGATATCAGGTGCCATCCTCACCGAGCTCGAGCTGCAACATCTCAAGGAGCTG
GACATCACGTCGTTCGGCACGCGGTTCGAGGTGTACAAGGAGATTGAGAAGCTGCGGGGC
GATCCCATGTCGCCGCGGCCAACCAGTGGCAGTACCAACCGACGCTCCTCCACCGCATAC
GTGTCGCCTAAGAAGGGTCATATGCGGAAACGGTCCCAGTCTCTGGACAATCTTGATTCT
CCTAGACTGAATAGCGAGTTTCCAATTTCGTCGCCTTCCACCGCTACACCCAGCACGGAG
TTTGCTATCCCCCAAGGAGGCACTATTGACGACTTTGGTTTTGAAGAGGGACAGCCCCAG
CAACCACCATCACAGCGACTGTCTCAGTCACAACGACAATCACAGTCTGAGCCCCAGACA
CAGAGGAGTTCGGTACACGACCCTCGCCTGTCTGCATCGCAGCAACAGCAATCTCGAGGA
CGGTCATCAGCCAACGTGTCTAACAACAGCTCACGTCAATCAGTTACAGAGCCTCCCAAA
CACGATCTTCCCGAGTTGCCGCGCAAGACGCAGCAGCCACCAGAGGGGGCTGTCGATTCA
CGCAAATCTAAGGAATCCGTTCGGGATTTCCCCCGCAAGTCTCGTGAGTCGCAACGTCCT
CCCCTCCAGCACGCCCACTCGTCGCACTCGACGCCACATTCGGTCATGGACTCGCCCCAG
CTGCACCGCCACCCCTCGGCGGGGCATTCTCTCTCATCTGAGAACGCCACTCATTTGGAC
TCGGACTCGCTGTCGTCATCCCCAGAGCCGAAATCGAGATCGTCGCGACGATCTTCTCTT
CTTGACGCGGTCATGAACGCCCCCTTGAGTCCTTCCAAGCGTTCTGGGCGAGAAGTAGGC
TCCTCAGATCCCGATCTCACTCTGTCGCCCATCCAGCACCAGAAAGAGCAGCGTCCAGAG
GCCATGCCCACTCCTCCCACACCCAAGAGAACCGGCAGCGGTCCCTTCAGAACGCTCCGA
AAGACTCCCTCGGCCTCCAACATGCGGTCCAAGAGTCTCAGCTCGAAGCAGAAGACGTCG
GCCTTCCGAGAAGGTATCAAGCACGTGAATCCCCGCGAGGCTGCCAAGAAGGCCGACTTT
TCGGGCTGGATGTCCAAGAAGGGTTCTCAGAGCGTGGGCACGTGGAAGCAACGGTTCTTC
TGTCTCACAGGCACCCGGCTGTCGTACTTTGCATCTCTTAACGACACCTACGAGCGAGGA
CTAATTGACCTGACGGCCCACAAGGTGGTTCCTGCACGTGACAATGAAGACAAGCTGGTG
GCTTTGTATGCATCGGGCACAGGAGCAGGTAGATACTGCTTCAAGCTGTTGCCGCCGGCT
CCTGGGTCCAAAAAGGGACTCATGTTCACTGTCCCCAAGGTGCACTACTTTGCGGTGGAC
ACCGCGGAAGAGATGAAGGGATGGATGAATGCATTTCTCAAGGCCACCATTGACCGAGAT
GATACAGTTCCTATTGTGTCGTCGTGTGTGACTCCTACTGTGACACTGAATCGGGCCCAG
GAGATGCTGCAGGAGTCACACAAGAACATGGCGTTGTTGCAGAGCCAGCTGGATGCCAAC
GGAGGAGACATCGAGGCTGCTGAACAGGCTATTGGCATCAAGACTCCTCCCATGTACAGT
GACGAGTTTACGGTTCCCAATGGTGGAGTGACGCGTAAGAAGTCGATGGTCATTTCCCCC
ACCTCACCGGCGTCCTCTTCCATGCAGTCGCCGAAGAGTTATCAGACTGCGAGTCCGCAG
GTTCCAGATATGCCCAGTATTGAGGGCAGTTTACAGGACTAACATTATAATGCTAATTGG
AGTTTGGAGTTTGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07612g_CDS-001

Protein length: 794 aa.
Product: Protein implicated in polar growth, functionally redundant with Boi1p, putative

>YALI0D07612g_CDS-001 MSVNPAPTPSHEVKTVLIAIHDFNNRSEDELTFVSGEQIQVIENDFEFKDGWYIGKRLIT
GATGLFPRVFASTVDELMDADVQPGQQLPSSGPTTPAGSNPSSRVVSQSQQSPSVTKTLT
DIDEVLSELNNHTSQLSVTKKASANGGELDPARVMSWTPIQVARWFENRGFEPAIPKLFV
EHKISGAILTELELQHLKELDITSFGTRFEVYKEIEKLRGDPMSPRPTSGSTNRRSSTAY
VSPKKGHMRKRSQSLDNLDSPRLNSEFPISSPSTATPSTEFAIPQGGTIDDFGFEEGQPQ
QPPSQRLSQSQRQSQSEPQTQRSSVHDPRLSASQQQQSRGRSSANVSNNSSRQSVTEPPK
HDLPELPRKTQQPPEGAVDSRKSKESVRDFPRKSRESQRPPLQHAHSSHSTPHSVMDSPQ
LHRHPSAGHSLSSENATHLDSDSLSSSPEPKSRSSRRSSLLDAVMNAPLSPSKRSGREVG
SSDPDLTLSPIQHQKEQRPEAMPTPPTPKRTGSGPFRTLRKTPSASNMRSKSLSSKQKTS
AFREGIKHVNPREAAKKADFSGWMSKKGSQSVGTWKQRFFCLTGTRLSYFASLNDTYERG
LIDLTAHKVVPARDNEDKLVALYASGTGAGRYCFKLLPPAPGSKKGLMFTVPKVHYFAVD
TAEEMKGWMNAFLKATIDRDDTVPIVSSCVTPTVTLNRAQEMLQESHKNMALLQSQLDAN
GGDIEAAEQAIGIKTPPMYSDEFTVPNGGVTRKKSMVISPTSPASSSMQSPKSYQTASPQ
VPDMPSIEGSLQD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG