YALI0D07590g

Overview

Description similar to uniprot|Q9USG9 Schizosaccharomyces pombe Hypothetical 61.6 kDa protein
Locus type CDS
Locus tag YALI0D07590g

Location

Species Yarrowia lipolytica Positions 978778..980880
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 2103 (nuc.)
Previous locus YALI0D07568g Next locus YALI0D07612g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07590g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07590gYALI0D07590g_mRNA-001YALI0D07590g_CDS-001

Nucleotide sequence

 

>YALI0D07590g
ATGGACAACGACAGAGTCAAGCGACGGAAGGTGGAGAGTGAGAGCGACAATGGCCGGACA
CAACTAACAGCCATCACGGCGCTTCCCGACGAGGAAAACACTGGATCTGTGCACCTCAAA
GACCTCATTGGATCACCCCATCTCGAGGCCATGTGGCAATTCAACTTCATGATTGATCTG
GCATTTGTACTCGATAATATTCACAAGAATGCCATGTCAAACATCAAGTGTCGGTTTGTG
ATGGGCGACTTTAGTGGCGAGAAGATCGCAGCCTTCAGAGCACAGGCCAAGAGTCTCCCG
ATAGCCGACAACATTGAAGTAGGAAGAGCCAAGCTGTCGAATCTGTTTGCAACCCATCAC
ACAAAAATGATGGTGCTGTTTTTTAAAGAGGACAAGGGAGAACGATCGGCCCAGGTTGTC
ATCCATACCGCCAATATGATTCATCATGACTGGGATAACATGACTCAGGGAGTGTGGAAG
AGCCAGAAAGTGAAGGAGAAGAGAAAGACGAATACGGAGGGCTCCACAAGCACGTTTGAG
ACTGATCTCGTTGCATACCTGTCTGAATACCAACTAGATACCACTTCCAAGTTGATTAAG
TTTCTGCAACGGTTTGATTGGAGCTCCGAAACAGCTCGAGTGGTGGGATCTGTTCCTGGA
ACTCATAAGGACAAGAAGTGGGGACTCACACGGGTTGCAGACTTGCTGGACGAGCACAAG
GAGGATCACAAGAGTGACTATGAGGGCTCAGAAAGTGACACGATTGTTCTACAGAGTTCT
TCTATTGGTTCTCTTGGAGTCACAGACAAGTGGATCACTCCTCAATTGGTAGGAGCTTTG
GATGGAAGATCACCAAGAGACCGAGATGGACATGGACTACCAGCTTCTCAAATTGTGTGG
CCTACGGTTGAGAATGTACGTCGGTCGTTTGATGGATACGATCTGGGTATGTCTATTCAT
TTCAAGAACGAATCCGACACCCATAGGAAACAGTATGCGTATATGAAGGAGCGGATGAAC
GTGTGGAAGGCCGACAACAAGCACAGAACCCGAGCCATGCCTCACATCAAGACGTATACG
CGTTTCACACGAGCTGGCAAGCTTCGATGGGTGCTTTTGACCTCGGCTAATATCTCCAAG
TACGCCTGGGGGTCAGTTTCTGCAGCTAAAGAGTCCAAGTTTAGCATTCCGTCGTGGGAG
CTGGGAGTTTTGCTGTTCCCCCAGGCGGTTGGGAAGGCTGTTTTCGATCTCAAAGACTCA
GTTATTCCTTACGACTGGCCCTTGACCAATTACAGTGCCAAAGACGAGCCGTGGACCAAG
AATGCCGATCATCTGGAGAAGGACACCAATGGGTTTCCGTGGGTAGTCACTTTGGATGGG
AAGAAGAAGCTGATGAGGAGTCATGAAGCATTGTAGAAGATACAGGAGGCCGTTGACCTG
ATGCCATAAAGCACTCACTAGAGTAGGAGATTGGAGGGCTATTCGAATGAGAGCAATCCA
GCTGGAGTCGGGCTCGACACCCATTTCAAGAGTGTATGTGCTGCTATTGACAGTCGCTTA
CAGTAACTCTTCAAGGAGTCAACCATGTCCGAGTACAATAGACCTGGTTGGTTGATGGAC
GAACATCGACAGATGGTAATAACAGAAGTGTCCACGCATTGAATCCATAAACGACAGTAG
ATGGATAGACAATAGACATCCAATATACTAGTCGTTACCATCCAATCTTAGCAACAGAGC
ATCTGGACATACATCACTATCGTACGATCTTTGTTGACCATTCGCTCTATAGAAGAGAAA
CCACCTTGAGCTTTGTTCTGGACACTACCTGTTGGTACCTGTAAACGTTTGCATAGTCTC
TAGTGTGGGTTACTCCTCGACACTGTTTGATACCTCCTTCAACTATCCATGACCTACTTA
GACCGACATCACCATCCAACTCAATGCGGCCATTCCACTCCTACCCACCAGAGCATCCGT
ATACCTCCACCCTCGGCATCTGTCCCCTCCCACGGGCTCTAGACCCATCCCGGCAGACCC
TGTCTCAAGGGCTGCTGACGATCATAGACCATTGTTTAATGTTGTAGAGAAGGACACATA
TGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07590g_CDS-001

Protein length: 472 aa.
Product: Conserved hypothetical protein

>YALI0D07590g_CDS-001 MDNDRVKRRKVESESDNGRTQLTAITALPDEENTGSVHLKDLIGSPHLEAMWQFNFMIDL
AFVLDNIHKNAMSNIKCRFVMGDFSGEKIAAFRAQAKSLPIADNIEVGRAKLSNLFATHH
TKMMVLFFKEDKGERSAQVVIHTANMIHHDWDNMTQGVWKSQKVKEKRKTNTEGSTSTFE
TDLVAYLSEYQLDTTSKLIKFLQRFDWSSETARVVGSVPGTHKDKKWGLTRVADLLDEHK
EDHKSDYEGSESDTIVLQSSSIGSLGVTDKWITPQLVGALDGRSPRDRDGHGLPASQIVW
PTVENVRRSFDGYDLGMSIHFKNESDTHRKQYAYMKERMNVWKADNKHRTRAMPHIKTYT
RFTRAGKLRWVLLTSANISKYAWGSVSAAKESKFSIPSWELGVLLFPQAVGKAVFDLKDS
VIPYDWPLTNYSAKDEPWTKNADHLEKDTNGFPWVVTLDGKKKLMRSHEAL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG