YALI0D07524g

Overview

Description weakly similar to uniprot|Q9UUE2 Schizosaccharomyces pombe csx2 putative ADP-ribosylation factor (ARF) GTPase activating protein
Locus type CDS
Locus tag YALI0D07524g

Location

Species Yarrowia lipolytica Positions 963138..966529
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3392 (nuc.)
Previous locus YALI0D07502g Next locus YALI0D07535g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D07524g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D07524gYALI0D07524g_mRNA-001YALI0D07524g_CDS-001

Nucleotide sequence

 

>YALI0D07524g
ATGGGAGCTGTACCCTCCAAACCAGATGACCCTCTCGGGACCTCGTGCTACATGGATCCG
GCGTTTGTGGTCGACCGCATCTCCGTCATGAGCACCTCTTCGTCGTCAGCAAAGGCCATA
GCCGCCAACAACAATGTGTCACAGGCCAGCGTGCGCAATTCCGGTGTGCTGGCCATTTCG
CAAAAGCCCAACGAGCAGGTCGATGTGCTTACTCATCTCGTTACTCCGCTGTGCCAACTA
TTACTTTCCTCTGCCGACCACACTCGCAATGTGCTGACGACGGCGAACGACTTTGTGCAG
GATCCAGACGATCCCTCTCGCTTCCTGGTGAGAGTGCGTCTGCCTCCAGATGCCACGTGT
CTCGCCCAGTTCGGTATCCAGCTTTCAGACAGCATTTCAGGCGGAGCTCTCATCACAGCG
TCCTCGCCCAAAGAATTGCACCACTTCATCACCAACGAGTTCTTCCACGACCCCAACATC
CACACACGGTCCAACGTAGCCTTCCTCGGCGACTTTACTCCGGGAAAGATGGAGTTTGTA
TGGGAACTATCACATCACCTGGGTAAGGGACCTCTCTACTGCTGTTTTGTGGAGTACGAC
AAACGACAAGACAGTCTACGGACGCTGGCCCAATTCAAGTTCTTTGCGGATACACAGACG
ACAACGCCACAGGTGACGTCAAAGCTCTCCAATCTTGCCTTATCGCCTTCTTCAGCTACC
CAAGGATCTTCCCCCTCCACAAACCTCACACCTCCATCTTCAGATATCACATACAACTCA
ACCGCATCCGCCTCTCCAGGATCGCCAACGTCGCCGCTACGGTCTCCAAAGACTAACGTG
TTTGATGCCTCGTCGCCCCTCAAACTAGCAGAACCCATGTCGCTGACACAGGCTCTGTCA
CAGCAGGACGCAATCAAGGGCCTGGGACAGAGCGTCGATTCTCTGCTGGAAAAGAGCATC
AGTCCTGCTGACGTCCCGATCCAGAACGGAGACGATGGACCTGTCTTTCGGGCCACCATC
CAGTCGCTGGAAAAGAAGACCCGATCTCTCAAGGCGCTCATCAAGCGGCTTTACAAGCAG
GCTGTGGTGGTATCTGAGCGACAATCGGAGCTCGCAACAGAGTACACGCTTTATCTGGAC
TATATGAAGGATATTGACGGCATCCAGGTTGCTGCCGGGGCGACGTGTGAGCAATGGGTC
CAGATCGCAGCCTGGCTTAACTCGTCCAATGTCGATCTGCAGATGCTGGTGCTAACGCCG
CTCAAAAAGTTTTACGAAAACGAAATCAAAATGTTCGAGGGCCACAAGAAGGACTTTGAC
GACGAGTCGCGCGAATACTACTCGTGGCTTAGCAGGTACCTGGGCCAAAAGTCCCCTCCT
AAGGCGTCGAAGTCAGATTCCAAGTACCAGGACAAGCGTAAGGCGTTTGAACTCAAGCGG
TTCGACTACTTTACATACCTCACAGACCTGCATGGAGGACGAAAGATGCAGGCTCTGACT
CTGAGCATTTCTCAGAACGAGGAGAAGCAGCTGGCGCGATTTCTGGCACTATCGGCTGGC
ATTCAGGCGTCCAAGCCCAAAATTGACCGACTGGTGGATCATGTAAAACAGGCGAGCAAG
GATTGGACCAGAAGCAGAACCGACGTGGAGATTCGACGCCGGCAGCTCGAGAGAAGCATT
GAGGCGGGCGAATCGACTCTTCCCAGCGCGCAAAACACACAGGCTCCTTCATTAAGTGCA
GCCCTCAGTAATTCAAACAACAGTGGCAGCACCAACAACCTTGGTGCTGGAGCTCCAACA
GCTCCCAATCTCTCCTCCACACCCATCCCCATTCCCACTCCCATGAGCGGACCCGGAGCA
CCTACCAGGTCTCGTTCTCAGGGCGCTAATCGAGCAATTCCCCGGCTCAATACCTCACTC
GGAGGCATGCAGGGTGCTCGGTCTGCTGTTCCTAGCCTTCCAGCTCTTCCCAATCTCACA
CCCTCCGCTTCTGCATCTAATGGCAGTTCCACAGCCCAGAATATCAAGTCGCTGATCATC
GACTCGCCCCCAAAGCCCTCAAAACGTCACTCATACATTGAGGATGTCAGTGATCATCTG
AATTTGCAACAACAACAGCAGCAGCAGCAACAGCAGCAGCAACACAGCTTTGAGGAGCTG
TCTCCTGACTCGGCAGAGCACAAAGAGGGCCTGTTGTGGTCCATGGACCCATCTACCAAG
AACATCAACAAAAAGACGGTTGGATGGCACAAATATTGGGTGGTGCTCGCTGGTGGACGG
CTCTCCGAGTACAGCAACTGGAAGCAGGGGCTGGAGGCTAACAGAACTCCCATCGACCTG
AAAATGGCGCTTTGTCGAGAAGCTCGAAACTCAGACCGTCGGTTCTGTTTCGAGATTGTC
ACTCCCCAAACCAAGCGGGTGTACCAAGCCACGTCGGAGGATGATCTGGCCACGTGGGTG
GCTGCTATCAATGGAGCAATCAGTACGTCGTTGGAAAACGTTTCTTCTCCTCCTCGTGAG
TCGTCTGCCCAAATGGCCCAGCGGGAATTATCCCGGTCCCCTCTGAAGGACAATGGGGCT
CATTTGAGACGAGTGGTGAGTTCTTCTGCCGGTACAGCCATTCCCGGGTCTGGCGCTCCC
CCTTCAATGAGCCAGGCCCCTCCACAGATGGGCCCCATGTCTCCGGACGTGTACAAGTTG
GCGGTGTCTATCGATCCATCCAACAGCACGTGTGCAGATTGTGCGTCGACGCAGGGCGTC
ACGTGGATCTCCCTGAACCTCATGGTGATCATCTGCACGCAGTGCTCGGCTGTGCATCGG
TCGCTGGGTTCACACGTGACTAAGGTTCGGTCCCTGACGCTTGACACGCGCGACTTCACG
CCGGCGGTGATCGATGCGATTCGCCAGGTGTGCAACCGAACTCTCAATGACATTTACGAG
GCCAAACTTAGCGACAAGTCGACGCTGGTCAAAAACAGAGAGCATTTCATCCAAAACAAG
TACGTTTCGCGCAAGTACGCTGCTCCGCTGAACGGCAACCAGGCGCTGATCGATGCAATC
GTGGCCCATAATGTGCTGGAGCTGCTGCGGGCCGTGTTTGCAGGCGCAGATATCAATCTG
CCTGTAAACGACGGTTTGTTGATCTACAGTCTGCGGGCCAACCCTGTGCATTTTGCCATT
CCTGAGCTGCTGCTGCTCAACGGCACCAAGGTACCCTCCATTGAGCTGAGCGGCAAGGTG
TCATTGTCCGAGGAGGCCAAGCGGTATCTATTGCAGAAGGTGGAGAGGGCGAATGAGTAA
GAAGGTGGCCCTGGTGCCATCGGGACTGCCACTGCGACTAGAGTGGCAGGTAGATATTTA
TCCATGTTAATTAATACTAATGTCTAACAACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D07524g_CDS-001

Protein length: 1100 aa.
Product: Conserved hypothetical protein

>YALI0D07524g_CDS-001 MGAVPSKPDDPLGTSCYMDPAFVVDRISVMSTSSSSAKAIAANNNVSQASVRNSGVLAIS
QKPNEQVDVLTHLVTPLCQLLLSSADHTRNVLTTANDFVQDPDDPSRFLVRVRLPPDATC
LAQFGIQLSDSISGGALITASSPKELHHFITNEFFHDPNIHTRSNVAFLGDFTPGKMEFV
WELSHHLGKGPLYCCFVEYDKRQDSLRTLAQFKFFADTQTTTPQVTSKLSNLALSPSSAT
QGSSPSTNLTPPSSDITYNSTASASPGSPTSPLRSPKTNVFDASSPLKLAEPMSLTQALS
QQDAIKGLGQSVDSLLEKSISPADVPIQNGDDGPVFRATIQSLEKKTRSLKALIKRLYKQ
AVVVSERQSELATEYTLYLDYMKDIDGIQVAAGATCEQWVQIAAWLNSSNVDLQMLVLTP
LKKFYENEIKMFEGHKKDFDDESREYYSWLSRYLGQKSPPKASKSDSKYQDKRKAFELKR
FDYFTYLTDLHGGRKMQALTLSISQNEEKQLARFLALSAGIQASKPKIDRLVDHVKQASK
DWTRSRTDVEIRRRQLERSIEAGESTLPSAQNTQAPSLSAALSNSNNSGSTNNLGAGAPT
APNLSSTPIPIPTPMSGPGAPTRSRSQGANRAIPRLNTSLGGMQGARSAVPSLPALPNLT
PSASASNGSSTAQNIKSLIIDSPPKPSKRHSYIEDVSDHLNLQQQQQQQQQQQQHSFEEL
SPDSAEHKEGLLWSMDPSTKNINKKTVGWHKYWVVLAGGRLSEYSNWKQGLEANRTPIDL
KMALCREARNSDRRFCFEIVTPQTKRVYQATSEDDLATWVAAINGAISTSLENVSSPPRE
SSAQMAQRELSRSPLKDNGAHLRRVVSSSAGTAIPGSGAPPSMSQAPPQMGPMSPDVYKL
AVSIDPSNSTCADCASTQGVTWISLNLMVIICTQCSAVHRSLGSHVTKVRSLTLDTRDFT
PAVIDAIRQVCNRTLNDIYEAKLSDKSTLVKNREHFIQNKYVSRKYAAPLNGNQALIDAI
VAHNVLELLRAVFAGADINLPVNDGLLIYSLRANPVHFAIPELLLLNGTKVPSIELSGKV
SLSEEAKRYLLQKVERANE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG