YALI0D06545g

Overview

Description similar to uniprot|P18414 Saccharomyces cerevisiae YBL040c ERD2 ER lumen protein-retaining HDEL receptor
Locus type CDS
Locus tag YALI0D06545g

Location

Species Yarrowia lipolytica Positions 837140..837954
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 815 (nuc.)
Previous locus YALI0D06523g Next locus YALI0D06567g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D06545g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D06545gYALI0D06545g_mRNA-001YALI0D06545g_CDS-001

Nucleotide sequence

 

>YALI0D06545g
ATGAACATCTTCCGTCTGGCCGGTGACATGGCCCACGTGGCCTCCATCTTCATTCTGATT
CACACAATCCGAACGCGCAAGTCGACCAGTGGCCTGTCGCTCAAAACCCAGGCGCTGTAC
CTGGCGGTGTTTGTGGCCCGTTACATGGACCTGTTTGTCTTCTCGGACGTGCGGGCAGGC
CGATACTACAACGTGCTGATGAAGCTGCTTTACCTGGGCACGTCCATCTACACCATCTAC
CTCATGACACAAAAGTACTCCAACGAACAGACCAACAGGCACATTGACACTTTCAAGGTC
GAGTACCTGGTGGGCCCGGCGGTGGTCATGTCGCTCATCTTCAATGACGGATACACGTTT
CTGGACATTCTGTGGTCCTTTTCTGTGTGGCTGGAGTGCACCGCCATCCTGCCCCAGCTG
TTCATGCTGCAGCGAACCGGCCAGGCCGAAAACCTCACCATCCACTACATTGCCGCCCTG
GGAGTCTACCGAGCGCTGTACATTCTCAACTGGATCTACCGTTTCTGGACCGAGGACAAG
ACCAACCTGGTGGCCTTCATTGGAGGCATCATCCAGACTGTCATCTACTCGGACTTCTTC
TACGTCTACTACGTCAAGGTCCTCAATGGCGAGAAGTTTGAGCTGCCTGTTTAATTAGAG
GCAATGGGTTAAAATAGAGCTGCTGCAAGAGCAAGGAAAAGACAGGTAGAGACTGCCAGA
GTAATGGTCTTAGGACCGTCACCGGACTGCCATGCACACACCGGTCATATAGTCAAATCA
GTGAAACGTTATGTGAGAAAGAACCTCATGTGCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D06545g_CDS-001

Protein length: 218 aa.
Product: HDEL receptor, putative

>YALI0D06545g_CDS-001 MNIFRLAGDMAHVASIFILIHTIRTRKSTSGLSLKTQALYLAVFVARYMDLFVFSDVRAG
RYYNVLMKLLYLGTSIYTIYLMTQKYSNEQTNRHIDTFKVEYLVGPAVVMSLIFNDGYTF
LDILWSFSVWLECTAILPQLFMLQRTGQAENLTIHYIAALGVYRALYILNWIYRFWTEDK
TNLVAFIGGIIQTVIYSDFFYVYYVKVLNGEKFELPV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG