YALI0D05731g

Overview

Description highly similar to uniprot|P0C0W1 Saccharomyces cerevisiae YJL190c RPS22A Ribosomal Protein of the Small subunit
Locus type CDS
Locus tag YALI0D05731g

Location

Species Yarrowia lipolytica Positions 734629..735097
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 469 (nuc.)
Previous locus YALI0D05697g Next locus YALI0D05753g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05731g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05731gYALI0D05731g_mRNA-001YALI0D05731g_CDS-001

Nucleotide sequence

 

>YALI0D05731g
ATGACCCGAACCTCCGTTCTCGCTGACGCTCTCCAGTCCATCACCAACGCCGAGAAGGCC
GGCAAGCGACAGGTCCTGATCCGACCTTCCTCCAAGGTCATCATCAAGTTCCTGACCGTC
ATGCAGCAGCACGGCTACATTGGCGAGTTCGAGTACGTGGACGACCACCGATCCGGCAAG
ATTGTGGTCCAGCTCAACGGCCGACTCAACAAGTGCGGAGTCATTTCTCCCCGATTCAAC
GTCAAGATCGACGACGTTGAGAAGTGGATCCAGAACCTGCTGCCCTCTCGACAGTTTGGT
TACATCATTCTGACCACCTCTGCCGGAATCATGGACCACGAGGAGGCCCGACGACGACAC
GTTGCCGGCAAGATCCTCGGATTCTTCTACTAGACGATTTGGGGTTTCTCAAAAGTCTGG
TACAAAAATAAAAATGAATTGTTTGAATGGAACCAGCATACACTGTTTT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0D05731g_CDS-001

Protein length: 131 aa.
Product: Ribosomal 40S subunit protein S22, putative

>YALI0D05731g_CDS-001 MTRTSVLADALQSITNAEKAGKRQVLIRPSSKVIIKFLTVMQQHGYIGEFEYVDDHRSGK
IVVQLNGRLNKCGVISPRFNVKIDDVEKWIQNLLPSRQFGYIILTTSAGIMDHEEARRRH
VAGKILGFFY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG