YALI0D05577g

Overview

Description similar to uniprot|Q9UUI3 Schizosaccharomyces pombe Putative human spliceosome associated protein 145 (SAP 145) homologue
Locus type CDS
Locus tag YALI0D05577g

Location

Species Yarrowia lipolytica Positions 718311..719944
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1634 (nuc.)
Previous locus YALI0D05547g Next locus YALI0D05599g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05577g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05577gYALI0D05577g_mRNA-001YALI0D05577g_CDS-001

Nucleotide sequence

 

>YALI0D05577g
CACACTACAACAAGTACAAGTACAAGTACAAGTACTCGCACCCTTCATCAGTCTGAAAAC
AGACATGGCTCCTCGAAAAAGTAAAAACCAGCTGCGGCGAGAGAAGGCCAAGGCTGCCAA
GCTTGCGGCCAAGGAAGAATCCGTCAAGCCGACAGAGCAGGCCGCTTCTGCAACGACAGT
TCCATCTACAACTACATCCGCAACCACCAAACCAGCATCTACAAGTTGGACAGCGTTTAC
GGTTGAGATTGACGAGAATGACGAAAAGTTTGCCGAATTCCAGCGCATCTTTGAGAAATT
CGACCCCGCCAATGTCCAAACCGAGCCGGAGGAGAAGCCCACAGCCACCGACAGCATGAT
GTACTCGGACGACGAAGAGTACGAGGATGACGACTATGTGGACGAGAAGCAGCAGACGTT
AGTTAGGTCGAAGAAGAGGGAGAAGATTCCGCTTGCAGAGCTCAAGGCCAGCACGTCCAA
GCCCGATCTGGTGGACTGGCACGATGCCGATGCCATGGAGCCGTTCCTGCTGGTGCATCT
GAAATCGGCACCCAACGTGATCCCCGTGCCTTCGCATTGGACACAGAAGCGCGAGTACCT
GAGCTTGAAGCGTGGTTTCGCCAAACAGCCGTTTGAGCTGCCTCAGTTCATCAAGGACAC
AGGCATTATGGACATGCGGGAGACTGGAGCCGAGGACGAAAGTACGCTCAAACAGCGGGC
AAGAGAACGGGTCCAGCCAAAGATGGGCAAGATGGATATCGACTACCAGAAGCTGCACGA
TGCATTCTTCAAGTTCCAGACTAAGCCTCGGCTCTACGAGTATGGAGACCAGTACTTTGA
GGGCAAGGAGTTTGAGCCTGATCTGAGCAAGTACAGACCTGGAGTGCTTTCCAAGGAGCT
TCGAGAGGCTCTCAACATGCCCCCCAATACCCCCCCGCCTTGGTTGTTGCAAATGCAGCG
GTTTGGACCCCCTCCTTCATACAAGGATCTGCGCATCCCAGGTGTCAACGCCCCCATTCC
TTCTTCGGCACAATGGGGCTTTCATCCGGGAGGATACGGAAAGCCACCACTGGACGAGAA
CAATCAGCCTCTCTACGGCGATGTTTTTGGACAGAATGTGGTCAAGCGGTCCACCGATGT
TGACAAGTCGTTATGGGGTCAGCCTGGAGAAGATGAGGAGTCTTCTGAAGACGAAGATGA
CGACGAAGAGGAGGAAGTGGAGGAAGAAATCGACGACGAAGGCCAGGGATACGTCGATGG
GGATGTTGCAGAGGCTCAAGAGCGTTACCAGGAGGAGCAAAAACGGTATCGGGGACCCAC
AGAGCAGGCTCGAGAAGAGGCTCCCTTGGATCTTCGAAAACGGCGCCACGAAGAGGTGGA
GGAGGATTCTGGAGAGAAGACTCTATATCGAGTGCTTCCCACCAAGAAAAAGGCAATTAC
TCAGCTCATGGACACGGATTTTGTTTATGACATGAGTGGAGAAGGAGCTAAGGGTGATAA
GAAGGAGAAGGAGAAGGAGAAGGGGACGGAGACTAGCAGGGACGATCTGCAATCAAACAT
TGACAACTTGTTTGATAGTGTTCGGGGTAAATAGATGGAGTATGTAATTTATCATTGTAT
TATACGTCAAGCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05577g_CDS-001

Protein length: 510 aa.
Product: Spliceosome associated protein, putative

>YALI0D05577g_CDS-001 MAPRKSKNQLRREKAKAAKLAAKEESVKPTEQAASATTVPSTTTSATTKPASTSWTAFTV
EIDENDEKFAEFQRIFEKFDPANVQTEPEEKPTATDSMMYSDDEEYEDDDYVDEKQQTLV
RSKKREKIPLAELKASTSKPDLVDWHDADAMEPFLLVHLKSAPNVIPVPSHWTQKREYLS
LKRGFAKQPFELPQFIKDTGIMDMRETGAEDESTLKQRARERVQPKMGKMDIDYQKLHDA
FFKFQTKPRLYEYGDQYFEGKEFEPDLSKYRPGVLSKELREALNMPPNTPPPWLLQMQRF
GPPPSYKDLRIPGVNAPIPSSAQWGFHPGGYGKPPLDENNQPLYGDVFGQNVVKRSTDVD
KSLWGQPGEDEESSEDEDDDEEEEVEEEIDDEGQGYVDGDVAEAQERYQEEQKRYRGPTE
QAREEAPLDLRKRRHEEVEEDSGEKTLYRVLPTKKKAITQLMDTDFVYDMSGEGAKGDKK
EKEKEKGTETSRDDLQSNIDNLFDSVRGK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG