YALI0D05313g

Overview

Description similar to uniprot|Q871I8 Neurospora crassa CAD71014 Hypothetical protein 20H10.310
Locus type CDS
Locus tag YALI0D05313g

Location

Species Yarrowia lipolytica Positions 685725..686716
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 992 (nuc.)
Previous locus YALI0D05291g Next locus YALI0D05335g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05313g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05313gYALI0D05313g_mRNA-001YALI0D05313g_CDS-001

Nucleotide sequence

 

>YALI0D05313g
ATGTCCGTGCGAGAACAGCTCCAGGAAATGGGATTTCCCCCGGCCCGAATCGAGGCCTCC
ATCAAGAACACGTCCGGCTCTCTGGAGGACGCAATTGGCTGGCTGGAATCCAACCAGATT
GACTACGACAAGGGCGTCTATGCTGCTGATGCCGAGGAGCAGACCGTCACGGGAGGCGTG
TCTGTGGTTGGAGACACAAAGGCGCCCGACGCATCAGCCGCCCCGATTGACGTGGATGCC
CAGGAGGCGGCTGCTGAGGCCGAAGTCGAGAAGAAGCCACTGTCCAAGGAGGAGAAGGAG
GCCAAGCTGGACGAGCTGCGGGCCAAGGCAGCGATTCGAAAGGCCGAGAACGAAAAGAAG
GATGCGGCCGAGCGAAAGCGAAACGACGAGATTTCGAAGAAGTCCCAGAAGGACAACCAG
GCCATCAAGGACGAGATGGAGCGAAAGACCGCCATCAGAGAAGCGCAGAAGAAGCGCAAG
GAGGCCGCAGACGACATTGCCGCCAAGAAGCGAATCAAGGATCTCATTGAGGCCGACAAA
CGGGCTCGGGCCGCTGAAAAGACAGGTACTAAACCCGCCCCTGCTCCTGCTCCTGTGCCT
GCTTCGAAACCTGCTGCTCCCCGAGCGGCCCCCACAGATTCGCGGATGCAGTTCCGAGTA
CCTGGCCAGCCCCCCATCGTCAAGACCTTCCCCGTGGAAACCAAGCTGCAGGCTGTCGCC
GAGGCGCTGTCGCAGGATATTGGAGTCCAGGCCGGATCTCTAGTATTCACTACCACTTTC
CCTACCCGAAAGCTCACCAACGCCGACTTTGGAAAGACCCTCAAGGAGGCCGATCTGATC
AATGCTGCTGTCATTGTATCTTTCTAAACAGAGCTCACGTCACCAATAGTTTATATATGC
ATCAAGAGAGTAAGATATGAAGAAGATGGAAACAGATGTACGAGTACAGTACATACATAT
TATAGATATTTATACCGAACAGTTTACCATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05313g_CDS-001

Protein length: 289 aa.
Product: Conserved hypothetical protein

>YALI0D05313g_CDS-001 MSVREQLQEMGFPPARIEASIKNTSGSLEDAIGWLESNQIDYDKGVYAADAEEQTVTGGV
SVVGDTKAPDASAAPIDVDAQEAAAEAEVEKKPLSKEEKEAKLDELRAKAAIRKAENEKK
DAAERKRNDEISKKSQKDNQAIKDEMERKTAIREAQKKRKEAADDIAAKKRIKDLIEADK
RARAAEKTGTKPAPAPAPVPASKPAAPRAAPTDSRMQFRVPGQPPIVKTFPVETKLQAVA
EALSQDIGVQAGSLVFTTTFPTRKLTNADFGKTLKEADLINAAVIVSF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG