YALI0D05247g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D05247g

Location

Species Yarrowia lipolytica Positions 678584..679437
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 854 (nuc.)
Previous locus YALI0D05228r Next locus YALI0D05269g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D05247g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D05247gYALI0D05247g_mRNA-001YALI0D05247g_CDS-001

Nucleotide sequence

 

>YALI0D05247g
ATGACGATACGGCTTTGGAGAGCGCTACTGGGCGTGGTTATCTGGGTCTCCTTCTTCAGC
ACGGCAATGGGAGCTCTCGGAAAGTACTTCATCCCGCCTGTGGACCGGTCCATCGAGCCC
ACCGGTCGCATTCGATTTTATGCGATTTCGATATCGTGGCCTTGTCCGTGGCTGTCGGCC
GTGGTGGTTCCTGTTGGAGACAAGATGAAGGTCGGGGCTGAGTTTGCCAGCATCGCATAC
CAGCATTACTTTTCGTACAGCGACGAGTCTGGATTCATGAGTAATGACAACCAGTATCTC
TATCTGGATCCAGATGCTCACGCCGTCACTCTGCAGCCAGTGCCTCATCCCGAGGTAGTG
TGGCGAAATGGTACGGTGGCATACAAGGTTGGTGGAGAGGACGGGAATATTACTTATGGT
GCTTCGCTGGCAGCCTGTCCCATTGAAGGATTCCCCTTCCAGTTTTCTATCGAATACAAC
TCGTCGTGCACAGGTGGTCACCGGGTCCAGCTTCGTGCTATGGGTGATGGAGCAGTGCTA
AGAGCCATGTCGCAACAAAGCGGTCAGGACGAGACTCCCAATGGGTCTGCTCAGGACCGA
GGGGCTGCCAAAAAAGGCTCTGCCCCTGTGCAGAAGCGAGATGGCATGGCAGGGGAAACG
GAGGTTGAGGGCTCACCGGAATTTGAGGCAAAGTTGAGACTGAGACTCATGGGCTTGATT
GACTAGGTATGGTAGATAGGTTATTTATTGACAACATGTGCGGAAAGATAGAGGGGAAAC
CGGAGATGGCGAGACACTAACAAGAATCTAGTAAAATGGCCTCAGGAGATGTACCAATAC
AAGTATAGTACATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D05247g_CDS-001

Protein length: 242 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D05247g_CDS-001 MTIRLWRALLGVVIWVSFFSTAMGALGKYFIPPVDRSIEPTGRIRFYAISISWPCPWLSA
VVVPVGDKMKVGAEFASIAYQHYFSYSDESGFMSNDNQYLYLDPDAHAVTLQPVPHPEVV
WRNGTVAYKVGGEDGNITYGASLAACPIEGFPFQFSIEYNSSCTGGHRVQLRAMGDGAVL
RAMSQQSGQDETPNGSAQDRGAAKKGSAPVQKRDGMAGETEVEGSPEFEAKLRLRLMGLI
D*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG