YALI0D04851g - PHR2

Overview

Description uniprot|Q6CA92 Yarrowia lipolytica YALI0D04851g PHR2 Cell surface glycosidase expressed at acicdic pH
Locus type CDS
Gene name PHR2
Locus tag YALI0D04851g

Location

Species Yarrowia lipolytica Positions 612882..614390
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1509 (nuc.)
Previous locus YALI0D04845r Next locus YALI0D04873g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04851g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04851gYALI0D04851g_mRNA-001YALI0D04851g_CDS-001

Nucleotide sequence

 

>YALI0D04851g
ATGAAATTCTCCACTCTCTCCGTTGCTGCTGCTCTGGCCGCCTCTGCCTCTGCTGCTCTC
GACCCCGTTGAGGTCAAGGGCAACGCCTTCTTCGTGGGCGACAAGCGATTCTACATCAAG
GGTATCGACTACCAGCCCGGTGGATCTTCCAAGGTCGTTGACCCTCTGGCTGACCCCAAG
ATTTGCAACCGAGACATTAAGTGGTTCAAGGACCTCGGTGTCAACGCCGTGCGAATCTAC
ACTGTTGACAACTCCGCTGACCACAGCGAGTGCATGAAGGCTCTCGACGATGCTGGCATC
TACCTGATCCTCGACGTCAACACTCCCCTCATCTCCGTCAACCGAGCCAAGCCCTACGAG
TCGTACAACGCCGCCTACCTGCAGCACGTGTTCGCTACCATCGACACCTTCAAGGACTAC
TCCAACACCCTTGGATTCTTTGCTGCCAACGAGGTCATCAACGCCAAGAACAACACCAAC
ACCGCCCCCGTCATCAAGGCCGTCGTCCGAGACATGAAGGAGTACATCAAGAACCAGGCC
AAGCGAAAGATCCCCGTTGGATACTCCGCTGCTGACGTTTCTGAGAACCGATACGAGATG
GCCCAATACTTCAACTGTGGCCCCGAGGAGGAGCGAATTGACATGCTCGGTATGAACGAT
TACTCGTGGTGCGGAAACTCCACCTACGAGGAGTCCGACTACGAGGCCAAGGTCAAGGCC
TACGGCAACTACTCCATCCCCATTTTCCTGTCCGAGTTTGGCTGCAACGAGATCCGACAC
AACGCCAAGGGAAACCCCGAGCGGCCCTTCACTGAGATTGAGACCCTGTACTCCGACAAG
ATGACCCCCGTCTTCTCTGGTGGTCTGGTCTACGAGTACTCTCAGGAGTCCAACGATTAC
GGTATTGTCAAGATCGACGGCGACTCCGTCTCCAAGTTTAACGGCGAGTTCGACATCATC
AAGGCTGCCTTTGCCAAGGCCAACCCCCAGGGTGACGGTGGATACAAGAAGGATGGCAAG
TCCTCCACTTGTCCTGCTCGATCCAACACCTGGGAGGGTGATGGACCCATTCCCGGCATT
GTTCCCCGAGCTAAGGACTACATGAAGAACGGTGCTGGCAAGCCCGAGGGTCTGTCTCAG
CAGTCCACCCAGGAGGGTGACTCTCACGAGTCCGGTCTCGACACCATTGGCAACAAGGAC
CCCAAAGAGTCTGATCCTGACTCCAACAAGTCCGACTCCTCTTCTTCCGGCTCTTCCGGA
TCTTCCAGCTCTGCTTCCTCCTCCGGCTCTGCCTCTGGTTCTGCCTCTTCTGCCTCTTCC
ACTGCCTCTGGCTCTTCTGGCAGCCAAAACTCCGCTGCTGCCAACGCCCCCGCTGCCGGC
GTTCTTGCTGCTGCCGCCATCATGGCCGCTCTTTTGTAAACAAATTAATTTATTTTAGAT
GAGCACGGCACCCCGCCACCATGATATAGATGATTTATATATTAATACACGAGATGATTT
ACGGTGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04851g_CDS-001

Protein length: 473 aa.
Product: Cell surface glycosidase expressed at acicdic pH
Gene: PHR2

>YALI0D04851g_CDS-001 MKFSTLSVAAALAASASAALDPVEVKGNAFFVGDKRFYIKGIDYQPGGSSKVVDPLADPK
ICNRDIKWFKDLGVNAVRIYTVDNSADHSECMKALDDAGIYLILDVNTPLISVNRAKPYE
SYNAAYLQHVFATIDTFKDYSNTLGFFAANEVINAKNNTNTAPVIKAVVRDMKEYIKNQA
KRKIPVGYSAADVSENRYEMAQYFNCGPEEERIDMLGMNDYSWCGNSTYEESDYEAKVKA
YGNYSIPIFLSEFGCNEIRHNAKGNPERPFTEIETLYSDKMTPVFSGGLVYEYSQESNDY
GIVKIDGDSVSKFNGEFDIIKAAFAKANPQGDGGYKKDGKSSTCPARSNTWEGDGPIPGI
VPRAKDYMKNGAGKPEGLSQQSTQEGDSHESGLDTIGNKDPKESDPDSNKSDSSSSGSSG
SSSSASSSGSASGSASSASSTASGSSGSQNSAAANAPAAGVLAAAAIMAALL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG