YALI0D04598g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D04598g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 575820..576685
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 866 (nuc.)
Previous locus YALI0D04576g Next locus YALI0D04631r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04598g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04598gYALI0D04598g_mRNA-001YALI0D04598g_CDS-001

Nucleotide sequence

 

>YALI0D04598g
ATGAACCCCATTGCCCTTTACTTCCTTGCCGCTGCCGTTCTGGCTGCTCCTCAGGACCAG
CAGGATCAGCAGGACACCCAGACCCGACCTGATCGAGATCCCCATCAGCGACCTCACATC
ACTCGAACTTGGGATGCAGCTGAACAGTCTGCTGCCCAGCAGGCTGCCTCTGATGCCATT
AACTTTGCTCATTCAGTTCATGGTGGAGCCGAAAGTCTTGCCATGGGCTTTGCTGGGCAG
GTTCCCTCGGACCCTGAAGAGGCTCGGGCGTTTGCCTCGTCTATTTATGCCGCAGAGTCC
TCTTTCCATCGTTCCATCTTCACTGACGGGGTGGATCTCCATGAGAGTATTCGGTCAGAC
GTCCATGACGCTATCACTGGCTCCCCTTCTGCGTCTGGAGCTGCCACTGGAGCTGCTGCT
GGCTCTGCTACGGCTGCAGCTGCTGCCGGAGCCTCTGCCATTGACTCCTCAGCCTCTGCC
ACTACTCTAGCCGCCAGTCTGCTTCAGAGACCGCCAAGGCCTCTTCTGCTGAAACTTCTG
CTGAAGCTCCTGCAGATAAATCTGTAGCTGCTTCTGCCGTTAAGACTGAAGTGGCTGGTT
CTTCCGTTGCCGCTTCTGTGGAGTCGAAGGCTGTGTCAAAGGCTGGTTCTTCTGCCCCTG
CCTCTGCTCCTGCCTCTGCCTCCGTTTCTGCTGCTCGTTCGGCCTCTGCCCCTCGCTCGG
CCTCTGCCAATGCTCCTGCTTCTTCTTCCCCTGCCGCTGGTTCTGCTTCTGCTGCTGTTG
TCATCCCCGCTAAAGCCAACTCGGCCGCCAAGGGTATTGCTGCCAGCGGACTCCTTGCAG
GTGCCGCCCTTCTTGCTCTTATTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04598g_CDS-001

Protein length: 288 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D04598g_CDS-001 MNPIALYFLAAAVLAAPQDQQDQQDTQTRPDRDPHQRPHITRTWDAAEQSAAQQAASDAI
NFAHSVHGGAESLAMGFAGQVPSDPEEARAFASSIYAAESSFHRSIFTDGVDLHESIRSD
VHDAITGSPSASGAATGAAAGSATAAAAAGASAIDSSASATTLAASLLQRPPRPLLLKLL
LKLLHKSVAASAVKTEVAGSSVAASVESKAVSKAGSSAPASAPASASVSAARSASAPRSA
SANAPASSSPAAGSASAAVVIPAKANSAAKGIAASGLLAGAALLALI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG