YALI0D04554g

Overview

Description weakly similar to uniprot|Q10478 Schizosaccharomyces pombe Hypothetical protein C17C9.06
Locus type CDS
Locus tag YALI0D04554g

Location

Species Yarrowia lipolytica Positions 570329..571996
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1668 (nuc.)
Previous locus YALI0D04532r Next locus YALI0D04576g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04554g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04554gYALI0D04554g_mRNA-001YALI0D04554g_CDS-001

Nucleotide sequence

 

>YALI0D04554g
ATGAGTGAGGTGAGTGGCATCAAAACGGCTCATGGAACGCCAATTGCTCGGGAGAGATGC
TAAAACCGGGCAAACCGACCTTTCCGCACACGCCCATTGTCCTCAGCCCCGAAATCCACC
TGTAACCAAGACTAACCCAGCTTACTATTCTGCCCAACAGCAGCAAGCTTGATGAAGCTG
TGAGTATGATGTGATTGAGAAGATACAAGAAGAGGAGAAGAGATTGGAGGAGAAGCTACA
GGCACTCTGTGCTATCCAATTCATGGCTAACCCAGATCGTTCTCAACGGAACTCGACCTG
TCGAGGTGGAGGCCGTGGAGGTGACTGGCATCTCGCTGCGAGACCCCTTCCTCAAGCGAC
AGCTGCGAGCTCTTCTGCAGCCCGGTCTGACTGTCAAGTCGCTATTTGACGGGGTGGAGG
TTGTCTCTGAAAAGCTGGCGGCCGTGCCTGTGCTGTCCGACGTCAACATCTCGCTTGATT
CCAAGCCCAGCGAGAAGCTCGCCAAGCTGGGCGGCATTTCCGTCAAGGCCACCATCTCGG
CCATTCAAAAGGACGCCTGCAACCTGACTCTGGCCTCCCAGCTTCGAGACGATGATGCCA
ACGCCATTATCCAGGTTACCCATCCCAACTTCTGGAACGGCAGCGAAACCGTGTTTGCAC
GAGCCACCTTTGGCACTCTGACCACCCGGTCCTACTCTGGTTCTGTCACCATCCCTATTG
GTCTGCCCGGCTCCCCTCTTTGGACCGTTGCGGGCTACCTGTCGCGAGCCAACGTGCCCT
CTGCCTCTCACCAGCAGATTCTCAAGGGCGTCAAGTGCGCTCTGACCAAAACCACTGGTA
CCAACACCGTGCTGCAGGCCGGCGTGGAGCAGTCGTTCCGAACCGTTACTGAGGTCGGCG
AAGCTGCCAGCGACGCCGTTCGAGCCGCTGCCGGAGACTCCGCCAAGACCTCGGCCTTCT
TTGCTGCGGCCAACGACACTCGAGACGACCCCTTTTTCCCCACCTCTGGTCGTCTGCTGT
CCGTGCTGGCTGAGAACGCCTTCAAGCCCAACGACAGCGCCCGAGGCCTCGTCCACTCCG
ATGTGGCCTTCCAGCGAATCGTTGCCCGAGCCGAGGGCTCTGTGGCCACCCCCGATAAGG
ACGTGGTCTTCAACTACGGTTTGTCTGCCGGCTCTACCCGAGGAGCCGTGCCTCTTCTGG
ACCGATTCTACATGGGAGGTGTCCCCGGACTCTCCGACGACCTCCACACCCTCAACACCG
TGTCTCTACCCGGCTTTTCGCGTCACGGACTGGGTCCCAAGGATGGCCGAGACTCTGTGG
GAGGCCAGTCGTTCGCCAAGGCCGGTGTTTCGGTCTTCACAGCCGTTCCCCGTCTGATCT
CCACTTCCCCCCTTAAATTGCACTTTTTCGCTAATGCCGGCCATCTCAGCAACGAGCAGC
ATCTGCTCAAGACCCTGCAGCAGGCCCCCGACAACTTTTCGGCCTCTGCTGGTGTGGGAT
TCGTCTACCGAAGCCCCCAGGCCCAGTTCGACCTCACCTGGGCCATCCCCGTGCAGCAGC
GGACTGGAGACGTCGTTCGGCCTGGAGGATCCATCGGACTCTCTCTGATGTGGTCAAAGT
AAGTACAGCATGTAGCATGTAGCTAGTATAGATTGGATATTGAATAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04554g_CDS-001

Protein length: 465 aa.
Product: Conserved hypothetical protein

>YALI0D04554g_CDS-001 MSELTILPNSSKLDEAIVLNGTRPVEVEAVEVTGISLRDPFLKRQLRALLQPGLTVKSLF
DGVEVVSEKLAAVPVLSDVNISLDSKPSEKLAKLGGISVKATISAIQKDACNLTLASQLR
DDDANAIIQVTHPNFWNGSETVFARATFGTLTTRSYSGSVTIPIGLPGSPLWTVAGYLSR
ANVPSASHQQILKGVKCALTKTTGTNTVLQAGVEQSFRTVTEVGEAASDAVRAAAGDSAK
TSAFFAAANDTRDDPFFPTSGRLLSVLAENAFKPNDSARGLVHSDVAFQRIVARAEGSVA
TPDKDVVFNYGLSAGSTRGAVPLLDRFYMGGVPGLSDDLHTLNTVSLPGFSRHGLGPKDG
RDSVGGQSFAKAGVSVFTAVPRLISTSPLKLHFFANAGHLSNEQHLLKTLQQAPDNFSAS
AGVGFVYRSPQAQFDLTWAIPVQQRTGDVVRPGGSIGLSLMWSK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG