YALI0D04510g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0D04510g

Location

Species Yarrowia lipolytica Positions 565472..569061
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 3590 (nuc.)
Previous locus YALI0D04488g Next locus YALI0D04532r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04510g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04510gYALI0D04510g_mRNA-001YALI0D04510g_CDS-001

Nucleotide sequence

 

>YALI0D04510g
ATGGCTAACGACAATCTGGCCAACCAGCTGCCGGAAAAGATCAGACGACGCCTTACTCCC
GTGGGGGTCCACAAAGGACCAGAAGATCCAGCAGCAGTGTCTACTACAATGACAACAGCT
GCAAAGGAGGAGACACACAGAGCCTTGAGACAGAAGGCGGCCCGAGAGTGCGAGAGAGTG
CGTCTGGTACACTCCAAAGTCCGGGAGAACGAGGCGCAGAAACGGCGCCAGGTGCTGGAA
AACCGCAATTCTAGATTGCAAGAGGCACAGGCTAGACGGGAGTCTGTGATCCAGAAAAGG
AGATCCTCTGCCCAGAGCTTTGTGGCCATGATTCGAGAATCCCAGCAGGAAATGAGCTCG
GAACAGTCAGTTGAAGATGAAGTTCCGGATGAAAAGCAGCCTCCAGGCAAATCAGACTTG
TCTACGATGTCTACGAATCAGCAGAACCAAACTGACTCTACAAGATCGCCTGTGACTACT
GCTACTACAAGCTCTGAGGGAGAACCTATCAATATCAACAACAATGACAAGTCAGGTGGA
GGTGCAGGATCTTCGTCTTCAGATCCATCGGCTTCGACGGCTTCTGAAAGAAGTTCTGTC
TCCAAACATGGACACTCCTACTTGGCATCTGTGATTCAAATCCAGAAGGATATTGAGCGG
CTGAGAGAACTGTCTCCATTGGTTCAGTATCTAATTCTCGACAGTCCCATTCCTTCCACT
GCTCCCTCGGACCCTCCAGACACTAACGACTTTCCAGATCACGTGGTGAAGTACATCAAG
AGTCTTCACCCTCTCGAATCTCAGGATAGGAAAGCCTTCACCATGCTGCTGCTTCGCGAA
CTCAAAGGTGACGGGATTAGAAGCATCAGATCACCCGCCACAAAGCTCTCCACTCTGTTA
GTTCACTTCGGAATCCCTTCCACTGCAGCAAGTGGTCACGTTATGCTCATGGCGCTTACT
CGGATGCTCAAAATCGCTCCTTCGGAATTCCAGCAGCCCTGGGAAGATGCCGTCTCTTTG
GTTTCGTGCTTTCGAAGGGCCTTAGCCAGTGTTACCAGCGAGACCCAGGTTCCTACATGG
TTTGCAAGCATATTTGTTCGGCACTATGAAGCTTCTTCAAAATACAGCGATAGAATGGAG
AGTCGAATCAATCGAGTCATGCTCAACCAGTTGGCAGAACAAGTCAGTCTAGTGCCTCTG
CTGGCTCAGGAGGTGGTTCAATACGGAGGAAGAGAAGGGGTGCTTCGAGAGATTGGTGTG
GACCGGTTCAACAAAGCTTTTCAGCGTCTTACCACCTGCGTGTGCCCTCGCAATGTGATC
CACAGCCCAGAAACTATGCGACAGGCCCGGAGATTTGCCTCTAGAGCTCTCTATGTTGCC
TGCAGATCTGCTCCTCACAATCTCACTCACGACACTTACACCACTCACATGAGACAGCTG
GAGATGTGGGTCAAGGACCCTTCATGGGACAGTATCTCGGACGATTTGTCTACCAATCTC
AGTCTTCAAATGAAGCGGTCTCGACGCATGTCTGACGAGTTTGCGGCTGCCGCCTTTTAC
TCTCAGTTCTACGAGCTCTTCCGGGTCTTTTGTATCCCTTCTGAATCTTCCAGTGCGTTC
GGAATCAGTGCCCAAGAGATCCAGGGCATTGTGTTTTCTTCTGGTGACTGCGAACACATG
CTAAAGTGGGTAGGACAGTACGTTTGTGCCACAGATGCTGTTCTAGACAACATCAATGAA
GACGAAGAGTGTTTTCCCAGAGACTTGATCAAGGAACAAGGAATGCAGGCCCCGTTCTTC
ACGCCGCATTGCCGCATTGATTTAGAAATGCTCATCATGACTCGAATGAAGGTGGACCGG
GTCGTGGAAAGCATGCACAAGTACGAGACCGAAAAGCTGTACTTCAAGGGCTACTCTCCC
ATGGGAGACGCTACTCTTCGGTTTGCCTACGAGCTCGGAGCTCTGTTCGAGCGATTCAGA
TTGTGCAAGAAGACAGTCACCTCCGTCCAGTGGAAGTACTGGTACCTTGTGTTCCTTACA
CGTGCCATTTGTGACATTGTTCCAACTCGCGACAACTATCACGTAAAGCTCTTTGACTAC
CTTATGGTTGAGCTTGAGTCTCAAATTACTAACCATATGTTTGCTGACAACCACTCGGAT
GTAGAGAATGGCAGCGATTATGGTGGTTCCAGGGACTCGTTCTGCTCCAGGGTCATTCTG
GACAAGCTTCTAAACTGTGTCGAGCAGTTTGGAAGCCTCCACCGAGCAACCGAGATTAAG
ACGGTGACTGGAAAGTTCCGACGACTTCAGCTAGTGACCGGAGGCTCTACTTCGTCTGCT
CCTACAGGTCCTGACTCAGACCAGTGGTTCGACGAGTGTGTCAGCGTCAATCTTCATGTT
GATCTTTACCTACTGGTGTCTCAGATGCTGTATGATATGAGAATCGGCGAGAATCTCAAT
GCGGCTATTCGGGGCAGCTACTCTTCGATTCTCCAGGAAGAGATGGATACGTTCGGCAAG
CAATGCAGAGCCGGATACGATGGTCTCAAGAACACCTCGGAGTTTCTCAAGACGGCTTTC
GACCACGCCATCACCAAACTTCATCCTGGAGATGTTCGTAATGAGTCTTCGTGCAGTTTC
CACGATCCTCTCTTGATTGGATTTTGCAACCTTGTATTCGGCAGCCCACAGCTTGATCTT
CCTTATGGCTATGGTCTTCCCGAGTCTATGTTTTCAATCTACCGGTTCATTGTTGCCTGC
CAAATTGAGACTCGGGCTCTGATTATTTGTGGATCCATTCTCCTACATGCCCAGAACACT
GTTCATGTGTCTGGCTACAGAATGAAACCCAGTCAGGCCGATGTGATGGTTCTACGAACC
GGAAGAATGCCCAAAAGCAGTACGCTCAAGACGCCGACGTTGTTTGAGGCAGTCTTGGAG
CTTGTGTTTGATCATCCTCACTTTGGAGAAGAAGAAGCTGAGTCTGTGGCTCACACTATT
GCCCAGCATGTGGAGATGCCGACTCTCGGTGAAGATGGACGCATGAGGGTATACAGTCAG
CTGGTAGACCGGATAAAGGCGTCAACAGCGCGAGTCGTGCACCAGAACGGCTCGGACTCG
GTTGGCAAGGTGCTTACCAAGCGGGTGGAAGGTCACTTTCTCTATTCTCATGCGCGGCTC
AAAAACATGGATCCTCCTGCGTCGGTGGAGACCATTGCGGGTTTCGATTCGGCCGTAGAG
CATCTAACGGAGCGCATGGGGACTGTATGGAAGACGCATTACGAGAGCCATGCGCATGGG
TATTTGGACATGGTGCACCACCTGCGGCCGGACCTCAAGCCCGCGGTGATTACTAGACTT
AGATTCAAGACTGTGAGGCCCAAGGAGCGACGAGTGCGGCCTCACTTCCGGTAGAAAAGT
TTGTGAAGGGGTTGTGAAGGGGCTGTGGAGGATTTATGTATTTAACAGTGACTCAACTCA
CCATCTACTGTATCTTTAAGCTTATCGCTGCCTGATTATGTACATACATACCGGTTGGTG
TATATCGTTGGGACTTACAGTACATAGTATTATACAATAGCATGCATTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04510g_CDS-001

Protein length: 1138 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0D04510g_CDS-001 MANDNLANQLPEKIRRRLTPVGVHKGPEDPAAVSTTMTTAAKEETHRALRQKAARECERV
RLVHSKVRENEAQKRRQVLENRNSRLQEAQARRESVIQKRRSSAQSFVAMIRESQQEMSS
EQSVEDEVPDEKQPPGKSDLSTMSTNQQNQTDSTRSPVTTATTSSEGEPININNNDKSGG
GAGSSSSDPSASTASERSSVSKHGHSYLASVIQIQKDIERLRELSPLVQYLILDSPIPST
APSDPPDTNDFPDHVVKYIKSLHPLESQDRKAFTMLLLRELKGDGIRSIRSPATKLSTLL
VHFGIPSTAASGHVMLMALTRMLKIAPSEFQQPWEDAVSLVSCFRRALASVTSETQVPTW
FASIFVRHYEASSKYSDRMESRINRVMLNQLAEQVSLVPLLAQEVVQYGGREGVLREIGV
DRFNKAFQRLTTCVCPRNVIHSPETMRQARRFASRALYVACRSAPHNLTHDTYTTHMRQL
EMWVKDPSWDSISDDLSTNLSLQMKRSRRMSDEFAAAAFYSQFYELFRVFCIPSESSSAF
GISAQEIQGIVFSSGDCEHMLKWVGQYVCATDAVLDNINEDEECFPRDLIKEQGMQAPFF
TPHCRIDLEMLIMTRMKVDRVVESMHKYETEKLYFKGYSPMGDATLRFAYELGALFERFR
LCKKTVTSVQWKYWYLVFLTRAICDIVPTRDNYHVKLFDYLMVELESQITNHMFADNHSD
VENGSDYGGSRDSFCSRVILDKLLNCVEQFGSLHRATEIKTVTGKFRRLQLVTGGSTSSA
PTGPDSDQWFDECVSVNLHVDLYLLVSQMLYDMRIGENLNAAIRGSYSSILQEEMDTFGK
QCRAGYDGLKNTSEFLKTAFDHAITKLHPGDVRNESSCSFHDPLLIGFCNLVFGSPQLDL
PYGYGLPESMFSIYRFIVACQIETRALIICGSILLHAQNTVHVSGYRMKPSQADVMVLRT
GRMPKSSTLKTPTLFEAVLELVFDHPHFGEEEAESVAHTIAQHVEMPTLGEDGRMRVYSQ
LVDRIKASTARVVHQNGSDSVGKVLTKRVEGHFLYSHARLKNMDPPASVETIAGFDSAVE
HLTERMGTVWKTHYESHAHGYLDMVHHLRPDLKPAVITRLRFKTVRPKERRVRPHFR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG