YALI0D04202g

Overview

Description similar to uniprot|P30777 Saccharomyces cerevisiae YGL142c GPI10 required for Glycosyl Phosphatdyl Inositol synthesis
Locus type CDS
Locus tag YALI0D04202g

Location

Species Yarrowia lipolytica Positions 525262..526844
Strain CLIB 122 Strand Antisense
Chromosome YALI0D Total length 1583 (nuc.)
Previous locus YALI0D04180g Next locus YALI0D04224g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04202g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04202gYALI0D04202g_mRNA-001YALI0D04202g_CDS-001

Nucleotide sequence

 

>YALI0D04202g
ATGATGCAACACAAGGAAATCAAACACCCGTATCAGGGCATCAAGTACACGGTGCTGGTG
GTGATTGCGGCGTTTCGAGTGGCCAACGCCCTCACCACAAAGACCTTCTTCCAGCCAGAT
GAGTACTGGCAGTCGCTGGAACCCGCACACAGACTGGCCTACGGCTACGGCTACCTGACC
TGGGAGTGGCATGAGGGTCTGCGGTCGTCGCTGCCACCTCTGGTTGGAGCAGGCATCTAC
AAGGCACTACAACTGCTAGGTCTTGACGATCCCCGAATCGTGCGTATCGCACCCAAGATT
GTCATGGCTCTCTTTGCGTCGGCAGGAGACGTGTACACATGGAAGCTGAGCGCTCGTCTA
CAAGGACCGGCCGAGGCTCCTTGGGCACTGTTTGTGTCCCTGCTGTCGGCCTTCAACTGG
TTCTTTCTGACCCGTACTTTCTCCAACTCGGCAGAGATGGTTCTGACCGCCGTGGCGCTC
AATTACTGGAGCTTCAATGGCAAGGAGGTCAATTTCAAACGGCTGTCAGTGGCACTCTTC
ATTGGAGCCATCAGCTGCGTGCTTCGACCCACAAATGCCATTCTATGGGCTGTGCTGGGT
CTCCATCTGGTCTTGACAACCACTGCCAAGATGCGAGTTCTGTGGCTGGCGGTTCGAAAC
GTGGCGCTAGTTTTTGCCGCCACATACTATATTGACTACCTCTACTACGGCGAGCCTGTT
TTCCCGCTGCTCAACTTCCTTAAGTTCAATTTGCTGCAATCCCTGGCTCACTTCTACGGG
ACCTCCCCCACTCTGTACTACTTTTATGAAGCGCTTCCTTTGCTCACCGTCGGTTGGCTT
CCCTTAACCCTGTGGGGCCTGTGGATTAACAGATCGCAGGTTCTCGTCAAGGCGGCCCTT
GCCGTTGTCGTTGCCTTCTCGCTCATCAGACACAAAGAGGTCCGCTTCATCTATCCCCTG
GTGCCCATTCTGCACATGGCTGCCGCCGAGGCTATCACCCAGACCCCCAAGAAGTTGCGC
AAGTGGCTGGTGTGGTCACTGGCACTCGTCAATATCCTTGTTGCGGGCTACTTCTCCCAG
GTGCACCAGCGAGGAGTGGTGGATGTGGTGGAGTATCTGAGCACAGAGCCCCAGGTAACG
TCTGTGGGCTTCCTCATGCCGTGCCACTCCACTCCTTACCAGTCCCATTTGCATCGAGAT
ATCCCTGTGTGGTTTCTCACATGTGAGCCCCCTATTGGTTTCACTGCCGAGGAGCAGATG
ACGTATCGGGATCAGGCCGACCAGTTCTACGACGACCCGCTGCAGTTTGTTCAGACGCAG
TTTCCTGAGTCGGTGGCTGTGTCTGCCCGAGAGGCCCGGACCCCTCTGTTCCACCCCTCT
CATCTGGCCATCTTTGAGAGCCTGGAAAAGAAGTCACCTGAGGTGATTGAGCATCTGGTG
GAGTTGGGATATAAGCGAGGAAAGACCTTTTTCAACTCGCATTTCCACGACGACTGGAGA
CGAGAGGGGGATGTTGTTGTTTATAATTTATAGGTTATGGGCTACGGCTCAGTATATACA
TTAATGCATTTATGCTGAAGTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04202g_CDS-001

Protein length: 511 aa.
Product: Integral membrane protein involved in GPI anchor synthesis, putative

>YALI0D04202g_CDS-001 MMQHKEIKHPYQGIKYTVLVVIAAFRVANALTTKTFFQPDEYWQSLEPAHRLAYGYGYLT
WEWHEGLRSSLPPLVGAGIYKALQLLGLDDPRIVRIAPKIVMALFASAGDVYTWKLSARL
QGPAEAPWALFVSLLSAFNWFFLTRTFSNSAEMVLTAVALNYWSFNGKEVNFKRLSVALF
IGAISCVLRPTNAILWAVLGLHLVLTTTAKMRVLWLAVRNVALVFAATYYIDYLYYGEPV
FPLLNFLKFNLLQSLAHFYGTSPTLYYFYEALPLLTVGWLPLTLWGLWINRSQVLVKAAL
AVVVAFSLIRHKEVRFIYPLVPILHMAAAEAITQTPKKLRKWLVWSLALVNILVAGYFSQ
VHQRGVVDVVEYLSTEPQVTSVGFLMPCHSTPYQSHLHRDIPVWFLTCEPPIGFTAEEQM
TYRDQADQFYDDPLQFVQTQFPESVAVSAREARTPLFHPSHLAIFESLEKKSPEVIEHLV
ELGYKRGKTFFNSHFHDDWRREGDVVVYNL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG