YALI0D04180g

Overview

Description weakly similar to uniprot|O74959 Schizosaccharomyces pombe Hypothetical short chain dehydrogenase
Locus type CDS
Locus tag YALI0D04180g

Location

Species Yarrowia lipolytica Positions 524215..525205
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 991 (nuc.)
Previous locus YALI0D04158g Next locus YALI0D04202g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04180g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04180gYALI0D04180g_mRNA-001YALI0D04180g_CDS-001

Nucleotide sequence

 

>YALI0D04180g
ATGGAACACATCAAAAACTTTTGGGCTGCCAAACCTCAGTACAAGGAAGTCGAGTACGCT
GATCAGAGAGACAAGACGTTTGTGGTCACGGGAGGACTGTCTGGAGTGGGAATGGAATGC
GCTCGTCTGCTTCTCAAGAAACGAGCTCGAGTCGTCATTGTTGGACGAAACAAGGACTTT
GCCAGGGACTTGCTGTCTGAACTAGCACGGGACATTCCCGAAGGAGAAGCTGCGTTTGTG
GAACTCGACTTGGCTGACCTGGAGTCTGTCAAAAAGGGCGGCCAGGAAATCGCCAGACAC
TACCCTGTAATCCACGGAGTCGTGCTCAACGCCGGAACTATGGCTCCTCCCTATGCCAAG
ACCAAACAGGGCCACGAGATCCACTGGGGTACCAACGTCATGGGCCACCATCTGCTCATG
AAGTATTTGGAACCGAGTGTACTGAGAGCGGCACATGACTCACCTCCAGGAACCGTTCGA
ATTGTCTGGGTCGCTGCCTCTTCATCCACTCTGATTCCAGGACTCGAGGGATCTATCAGA
TTCAACACCAACAATGAAGACGAGAAGAAACCTCCTCATGTACTCTACAACATGAGTAAG
ACAGGAAATGCGTATGAGGCGTACCTGTGGTCTAAGTTTCATCCACACTCGGGAGTCAGC
TCTGTCTCTATGGACCCTGGAAACCTCTCCACCAACCTCACTCGTCACTCGGGCGGTCTA
GTCCATCGATTCAAGGATTACGTGCTCTACCCAGCCAAATTCGGAGCATACACCGAATTG
GCAGCTCTACTGAGTCCCACAATCAAAGATGGTGACCACCTGGTGCCGTGGGGAGTTCCA
GGAACCCTCAGACACGATGTGGATGAGGCCAGGAGAGGACCGAAGGGAGAGGAAATGTGG
ATAGAGCTGGAGAGAGACACTCAGGCTTTTTTCCAGCCTGAGGAAGTGCACTAAGAACAT
AACTGGTAGTATCGAATAAATAATGACCCTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04180g_CDS-001

Protein length: 318 aa.
Product: Conserved hypothetical protein

>YALI0D04180g_CDS-001 MEHIKNFWAAKPQYKEVEYADQRDKTFVVTGGLSGVGMECARLLLKKRARVVIVGRNKDF
ARDLLSELARDIPEGEAAFVELDLADLESVKKGGQEIARHYPVIHGVVLNAGTMAPPYAK
TKQGHEIHWGTNVMGHHLLMKYLEPSVLRAAHDSPPGTVRIVWVAASSSTLIPGLEGSIR
FNTNNEDEKKPPHVLYNMSKTGNAYEAYLWSKFHPHSGVSSVSMDPGNLSTNLTRHSGGL
VHRFKDYVLYPAKFGAYTELAALLSPTIKDGDHLVPWGVPGTLRHDVDEARRGPKGEEMW
IELERDTQAFFQPEEVH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG