YALI0D04158g

Overview

Description weakly similar to uniprot|P12887 Saccharomyces cerevisiae YML021c UNG1 uracil-DNA glycosylase
Locus type CDS
Locus tag YALI0D04158g

Location

Species Yarrowia lipolytica Positions 522071..523196
Strain CLIB 122 Strand Sense
Chromosome YALI0D Total length 1126 (nuc.)
Previous locus YALI0D04136g Next locus YALI0D04180g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0D04158g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0D04158gYALI0D04158g_mRNA-001YALI0D04158g_CDS-001

Nucleotide sequence

 

>YALI0D04158g
ATGAAAATCACTGACGCGTTTCAAAAGGCGCCCATCCTGGCCACGACTACCAAGACAGTT
GCTAACGCTTCATTCGACCAGTCGGCCTGGCTCAATGGCCTCAAACCGGCCGATAAGGAG
CTACTGGACACGGAGATCACCCATATTCACGACTCGTGGTTGCCACACCTCCACAAGGAG
ATCAGCAAGCCGCAATTTCTCAATTTGAAAAAGTTTCTGGCCTCCCGAGAAGCTGCCGGA
GTGAACATTTTCCCGCCCAAAAAGGACATTTACTCATGGACCAGTCTTACTCCTTTCGAC
AAGGTCAAGGTGATCATCATAGGACAAGATCCCTATCACGGCAAGAATCAGGCTCATGGG
CTGGCCTTCTCCGTCAACCCACCCACTCTGCCGCCGCCGTCCCTCAAAAACATGTACAAG
TGTCTCAAGAACGACTACCCAGACTTTGACGTGCCTGCCAAGTCGGGTCTATTGACCCCG
TGGGCCGAACAGGGTGTTCTAATGCTCAACACGGTGCTCACGGTTGAGGAAAAGAAGGCC
AATGCGCACAAAGACAAGGGTTGGGAGGCCGTGACCTTTACAGCTCTGTCAGCGGCTGTC
AAACACAACTCTGGCTGTGTGATTTTGGCGTGGGGAAGCCCTGCTGCCAAAATCGCAGAC
AAGATGAACATTGACAAGAGCAAGCACCTGGTGCTCAAGGCCGTCCACCCCTCGCCATTG
TCGGCACATCGAGGATTCCTCACGTGTGGACACTTTAAGCAGGCCAACGAGTGGCTTGAG
AAGCGGTACGGTCCAGAGGGGATTATCAAGTGGGGTCTTGAGGGTAAGACAGTTGGCAGT
AAGGGGACTAAGGAGGCCACCACTGACACGGTCAAGGAAGAGCTTGCTAAAGAGTCTATC
AAGGAGTCCGTTGAGACAGTTAAGGAACCTACTGAGCAGTCGTCAGTCAAACCGACATCT
GCGAAGTCCACAGCACCACCATCATCACAAGAAAAGCTAGACCAACTCCTGTTGTCTGTG
CCTGATGTGGATGATGACGAACTGGACGATATCCTGCCTCCCCCCAAGAAGCAAAAGGTG
TAATTAGTGTATATAACGAAGGTATCGCACGACATTATGGTATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0D04158g_CDS-001

Protein length: 361 aa.
Product: Conserved hypothetical protein

>YALI0D04158g_CDS-001 MKITDAFQKAPILATTTKTVANASFDQSAWLNGLKPADKELLDTEITHIHDSWLPHLHKE
ISKPQFLNLKKFLASREAAGVNIFPPKKDIYSWTSLTPFDKVKVIIIGQDPYHGKNQAHG
LAFSVNPPTLPPPSLKNMYKCLKNDYPDFDVPAKSGLLTPWAEQGVLMLNTVLTVEEKKA
NAHKDKGWEAVTFTALSAAVKHNSGCVILAWGSPAAKIADKMNIDKSKHLVLKAVHPSPL
SAHRGFLTCGHFKQANEWLEKRYGPEGIIKWGLEGKTVGSKGTKEATTDTVKEELAKESI
KESVETVKEPTEQSSVKPTSAKSTAPPSSQEKLDQLLLSVPDVDDDELDDILPPPKKQKV
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG