YALI0C08184g

Overview

Description weakly similar to uniprot|Q6C3D5 Yarrowia lipolytica YALI0F00616g
Locus type CDS
Locus tag YALI0C08184g

Location

Species Yarrowia lipolytica Positions 1096440..1097591
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1152 (nuc.)
Previous locus YALI0C08162t Next locus YALI0C08206g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C08184g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C08184gYALI0C08184g_mRNA-001YALI0C08184g_CDS-001

Nucleotide sequence

 

>YALI0C08184g
ATGGTACTTAAAAGCATTGCAGATGCAGACTCCCAATCTAACCCCTTCTCCGCACTTGCT
CCAGAAATAATCCACGAGATTCTCTCACATCTAGATATCCCTTCGGTATGTGCCCTATCT
CATACAAATACCTTTTTGAGAAGTTCTGTGACCGAAGACCAGTTTAAACTGCATCTGACC
GCAGTTTGTCCCTGGTTTGATCCTGACTCGTCGCGTTTCAACACGTTTAAGGAGTGTACA
TTTGAATATCTTCGTCGAATGAGTGGCAAGAAGTTCGCTCCCTGTCTTGATAACGTCAGT
ACACGTCTTCCTGTTGAGGATATGGGACCGTCTGTTCAATCTGTGAATGGATATGTGGAG
ATGATCAAAGTCAGGAACACCCATAAGTTCTCTGACAATGTGTACATATCGAAATACGGA
ATCAGAGTCAACCTCGGGAGCCTGGAAATGTGGTCTGCACCTGATTTTCAATATATCATC
TCTCTCCCTCAACTCTTTGCAACAATCATCGGTCACAGATGTACTCAATATGTTCTCGGA
CAGCTTCTCCTGCAATACAGAGACGAAGATCATCCCCGCATATACGATCTACCTGACTGC
GACGACTACCGGATGATTCACTGTGGCAAGCACGTGTTTGTTTACACCATCAAGTGGGAC
CTGGAGTATGAGTACCCTGAGGACAAGGAGCTCCTGCTGTATGTATCTGAGGACGGTCTT
CGACAAGTGATGGTTGGTATTCCATCTCATCGGCCAAATTCAGTGTATGACGGCTATTTC
TTCTTCACCGATGACAACAACGCACTTTGTTTCGCGCAAGCGGGTCTTGACGGGTTACAA
GTGATTGATCGAGCCCCTAATAGACGTCGCTGTGATTTCTTTTGTGATAGCGGCAAGACA
GGTCATATGTTTGTGCAAGATCAGATGGGTAACAGTCATCTCTGGGATATGGCTCGCCAC
ACCATGCATCTTATACCACCGTCACACCGTGTCCAGATTTCGGATGTGCCTATTTTCCTT
ACGGTGCCGTATCCTGGTATAGACAGTGTAGACTTGGAGATGGCTGAGGCCCAGGACGAG
GTTCCGATCGAGCCTGAACGAGCCCCCTTTGCTCTGTTTGCTTCGCTCCATCACTTGGCG
GGGATATTTTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C08184g_CDS-001

Protein length: 384 aa.
Product: Hypothetical protein of a 19-member gene family, conserved in the Yarrowia clade

>YALI0C08184g_CDS-001 MVLKSIADADSQSNPFSALAPEIIHEILSHLDIPSVCALSHTNTFLRSSVTEDQFKLHLT
AVCPWFDPDSSRFNTFKECTFEYLRRMSGKKFAPCLDNVSTRLPVEDMGPSVQSVNGYVE
MIKVRNTHKFSDNVYISKYGIRVNLGSLEMWSAPDFQYIISLPQLFATIIGHRCTQYVLG
QLLLQYRDEDHPRIYDLPDCDDYRMIHCGKHVFVYTIKWDLEYEYPEDKELLLYVSEDGL
RQVMVGIPSHRPNSVYDGYFFFTDDNNALCFAQAGLDGLQVIDRAPNRRRCDFFCDSGKT
GHMFVQDQMGNSHLWDMARHTMHLIPPSHRVQISDVPIFLTVPYPGIDSVDLEMAEAQDE
VPIEPERAPFALFASLHHLAGIF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG