YALI0C04774g

Overview

Description similar to uniprot|Q9C1M3 Emericella nidulans cdc11p Septin
Locus type CDS
Locus tag YALI0C04774g

Location

Species Yarrowia lipolytica Positions 625230..627255
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2026 (nuc.)
Previous locus YALI0C04754r Next locus YALI0C04796g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04774g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04774gYALI0C04774g_mRNA-001YALI0C04774g_CDS-001

Nucleotide sequence

 

>YALI0C04774g
ATGCAGCGTGTTGCCAGCAGTTCTTTGGTGAGTATAGTGACATGACAAGAGCGCACATGT
GTGTGACGTTGGTTTGAAGGAGGGGTGGGGTGTAATTACACTCATGGGTTCTATCGTACG
ACAGCGAGATTGGACGTGCTGGATAAAACCGGCGCCTTGTTCATCAAAAGGAGTGCTTTT
TGATTGTGGAATCGTTTGTGTGTCCCCCTGTAGGCAAGGTGCGTTTCCGCGGCAACAGCG
TCCTGGTCGAATCCGACTAGTATTACGAGCAGTCAATATGTTGGGACGTGACGTGGCCTC
TTCTTGTACTTCATCTTTATCGCCATGGCCAGAATCTCGAAACCAAGACCGTCCAACGCC
TCCGTCGCCTCATACGGCTCCTTGAACGCCTACGCGCAGACCTATGATTTGAGTACCGTC
TTTGGGGAGAGAGGGATGATGCAGAGGTGGTGATAAATGGGTGAAGATGGAGGGGTAATG
TCACGGTGGCAAACTCGGCGGGTTATGGTTGCTTCAACGAACCGTCGGACGGCTGTGGTA
GATACTACCACGCACAGGCAGTAACAATGACTTCAAAACTACAGCTGGGGGCACTGTGTT
CCAGTGTTCGATTTGCAATGAGAAAGGAACGTCAGATGCTTCCATTGAACGCGTGGCAAC
ACTTCTGTAGTCTCCACTGGCCGTCGCTACCATACCGTCACCATATGCATGTCACACAGT
CACCATTGCCGTCATCTTTAGTCCTTCACGCATTGCTAGCCCTCACTCAGTGCACAATCA
TTTGTTCCCACTTTCCGAACCCTACTAACTCAGCTCCGACACAAAAAAGTCCTGAAAAAA
GGGACCAAATTCTCCCTCCTGGTCTGCGGCCCTGGAGGCTCTGGTCGAGCGACCTTCGTT
AACGCCCTGATAGACTCACAACTTGGCGAATCCGGCGACAAGGTAAAACAGCTTATCCAC
CGAACCGAAGTAGCACCCGAAGAAGCTCATATCGAACCAGGTATCACTCTCGAGCCCTGG
ACTGAGACCCTCTACGACGAGGAGGGTGGAGCGCTGTCAATCACGTTTGTTGACACTCCC
GGTTTTGGAGACAACATCAACAACGAAGTAGTGTTCCCCGAGCTGCTAGGTTTCATTGAG
CGTCAATACGACAATGTGCTTGCGGAAGAGAATCGAATCCGTCGAAACCCCAAGTTCCGA
GACGATCGAGTCCACGTACTTCTCTACTTCATTGAGGCGACTGGACACGGTCTGCGGGAG
CTGGACGTGGAGCTCATGCGTCAGATGAGTACACGGGCCAACGTGATCCCCATTCTCGCC
AAGGCCGACACTCTGACACCCTCCGAGCTAGCTGAAAACAAACGGCTCATCATGGAGGAC
ATTGAGTACCACCAGATCCCCATCTACAACTTCCCTTACGACCCTGAGGAGGATGATGAG
ACCATTGAGCAGAACTCCCACCTGCGTTCCCTGCTTCCGTTTGCCGTGATTGGCTCCAAC
GAGGTCGCTGTGGTCAACGGCAAGCGATGTCTTGTTCGAACATACCCCTGGGGCTCTGTG
GACATCGAGGATCCCCGTTTCTCCGACTTTGCCGTGCTTCGAAACGTGCTGCTGGGCTCG
CATCTTGAAGACCTCAAGGAGGCCACCCACTCGATTCTGTATGAAAACTACCGAACCAAA
AAGCTGTCGACCAACGACTCGCCGCTCATCGACCAGTCTGCGACCCCCGACATGTCAGAG
GAGTCGTTTGTGGCCCGAGAGGAACGTCTGCGAGCCGAGGAGGCGCGATTCAAAGAGATT
GAAGAAAAGGTGCAGAGAGAGATTGCCCAGAAGAAGCGCGAGCTGCTTGAACGAGAGCGG
GAGTTGCGGGAGATTGAGGCAAGGCTCAAGAACGAGTTGGTTGTGGAGGAGTAGACGTAA
GCTAGGTATACGCGATATGGAGGCGAGGTTTTTAGTTCGCCAGAGGAGTAGATGCTCCGA
GGCATGTAATGTTTAACAGATTATTATTGATGTTCCTGCAGCCAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04774g_CDS-001

Protein length: 376 aa.
Product: Septin, putative

>YALI0C04774g_CDS-001 MQRVASSSLLRHKKVLKKGTKFSLLVCGPGGSGRATFVNALIDSQLGESGDKVKQLIHRT
EVAPEEAHIEPGITLEPWTETLYDEEGGALSITFVDTPGFGDNINNEVVFPELLGFIERQ
YDNVLAEENRIRRNPKFRDDRVHVLLYFIEATGHGLRELDVELMRQMSTRANVIPILAKA
DTLTPSELAENKRLIMEDIEYHQIPIYNFPYDPEEDDETIEQNSHLRSLLPFAVIGSNEV
AVVNGKRCLVRTYPWGSVDIEDPRFSDFAVLRNVLLGSHLEDLKEATHSILYENYRTKKL
STNDSPLIDQSATPDMSEESFVAREERLRAEEARFKEIEEKVQREIAQKKRELLEREREL
REIEARLKNELVVEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG