YALI0C04686g

Overview

Description similar to uniprot|Q9P702 Neurospora crassa Probable sugar transporter
Locus type CDS
Locus tag YALI0C04686g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 619721..621532
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1812 (nuc.)
Previous locus YALI0C04642r Next locus YALI0C04730g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04686g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04686gYALI0C04686g_mRNA-001YALI0C04686g_CDS-001

Nucleotide sequence

 

>YALI0C04686g
ATGTCGCTGGCTATCACCAACATGAAAAACTGGCTCTATCCGAAACAATCCCGAGAAGTC
AAGACTTCTTTTGTTGGCCTTCGAGGTCAAACTCTGCACCATTACGTCGCTACAGTGGCA
GGTATGGGCTTTCTGCTCTTCGGTTATGATCAAGGAGTAATGGGAGGTCTACTCACGCTG
CCTACTTTCATTAAGCAGTTCCCAAAAATGGATACTTCATCTTACCTGCCTCCCAAAGTC
AAGTCTTTCAACACTACTGTTCAGGGAACAGCTGTGGGTATCTACGAAATTGGATGTATG
ATAGGGGCTCTTTTTACCATGTGGGGAGGAGACAAATTGGGTCGTCGATATATCATCTTC
TACGGTTCGATTATCATGACTATCGGAGCTATTCTTCAGTGTGCTTCATACTCCTTAGGT
CAATTCATTACTGGCCGTGTGATTTCTGGCATTGGAAACGGGTTTATTACTGCCACCGTT
CCTATGCTCCAATCTGAATGCGCTAAACCGGAGAAGAGAGGAAAGCTGGTGATGTTGGAA
GGAGCTCTCATCACTGCAGGTATTGCCCTTTCGTATTGGATCGACTTTGGTTTTTACTGG
GTTCGAACGAATGATGCTGACTGGCGCTTTCCAGTGGCTTTCCAGATTGTCTTCTGTTTG
TTTCTGATGTTTACAGTCTTGACCTTACCGGAGTCTCCTCGATGGTTGGTGAAGAAACTG
CGATTCGAAGAAGCCGCCGGGGTCTTTGCAGCCCTTGAAGATGTGGATATTGATGATCCA
TACGTTGTCAGTCAAGTGACATACGTGAAGGAGTCCATCATGTTAGAGCAACTTGCTCAA
ATGGGAGTTGAAGGTACCGCAGCTAGGCAAAAGATTCTTTATGGAGAATTCCAGATGGGT
GCGGAGCTTCCGTTTCTCTAGCAAATGAAACTCATGTTTACTTTCGGTAAAAAGAAGAAC
TTCCATCGAACTATGCTCGCTTATTGGAACCAGGTGATGCAGCAGATTACAGGCATTAAC
CTCATCACCTACTATGCTGCGTACATCTACGAGACGTCAGTAGGTATGAACGCTACCGAT
TCTCGAATTCTTGCGGCCTGCAATGGAACCGAGTACTTCCTCGCTTCTTGGATTGCCTTC
TACACCATCGAAAGATTTGGTCGACGAAAGTTGATGATTTTTGGAGCCATTGGACAAGCA
GCAACCATGGCTATTCTAACAGGATGTGTCTATGCTGCATCTACTCCTGAAGACGGGGGC
TTAAATAAACCCAGAGCTGGAATTGCGGCAGCGGTTTTCTTGTTCGTCTTCAACACCTTC
TTTGCAGTCGGTTGGCTCGGAATGACATGGCTTTACCCTGCTGAAATCAGTTCTTTGGAA
ATCAGAGCACCCGCCAACGGTCTTTCCACGTCAGGTAACTGGGTCTTCAATTTCATGGTG
GTCATGATCACCCCGGTGGCTTTCGATACAATCAAGTGGAAAACGTACATCATTTTCGCC
TGTATCAACGCAGCTATGGTTCCTGTGGTGTACTTCCTCTATCCCGAGACAGCTGGCCGA
TCTCTGGAGGAGATTGATCAGATTTTCGCCGACTCCAATCCCAGAACTCCTTGGGATGTT
GTGTGGATTGCCCACCGGCTTCCTCGCCACACCGTGGCAGATGACTATCTTGAAGAGCGA
GTGTTTGAAGAAGACAAGCATGTTACTGCTCATTCTGAGACAGCCTCTGAGGAAGTCGGG
GCGCCTGACAGGGTTTCTGGAACAGATAAAGAGATTGAGAGGAGTGCCAATAACACTACT
CAGCCAGCTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04686g_CDS-001

Protein length: 603 aa.
Product: Sugar transporter, putative

>YALI0C04686g_CDS-001 MSLAITNMKNWLYPKQSREVKTSFVGLRGQTLHHYVATVAGMGFLLFGYDQGVMGGLLTL
PTFIKQFPKMDTSSYLPPKVKSFNTTVQGTAVGIYEIGCMIGALFTMWGGDKLGRRYIIF
YGSIIMTIGAILQCASYSLGQFITGRVISGIGNGFITATVPMLQSECAKPEKRGKLVMLE
GALITAGIALSYWIDFGFYWVRTNDADWRFPVAFQIVFCLFLMFTVLTLPESPRWLVKKL
RFEEAAGVFAALEDVDIDDPYVVSQVTYVKESIMLEQLAQMGVEGTAARQKILYGEFQMG
AELPFLQMKLMFTFGKKKNFHRTMLAYWNQVMQQITGINLITYYAAYIYETSVGMNATDS
RILAACNGTEYFLASWIAFYTIERFGRRKLMIFGAIGQAATMAILTGCVYAASTPEDGGL
NKPRAGIAAAVFLFVFNTFFAVGWLGMTWLYPAEISSLEIRAPANGLSTSGNWVFNFMVV
MITPVAFDTIKWKTYIIFACINAAMVPVVYFLYPETAGRSLEEIDQIFADSNPRTPWDVV
WIAHRLPRHTVADDYLEERVFEEDKHVTAHSETASEEVGAPDRVSGTDKEIERSANNTTQ
PA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG