YALI0C04543g

Overview

Description weakly similar to uniprot|Q05468 Saccharomyces cerevisiae YDR333C Putative protein of unknown function
Locus type CDS
Locus tag YALI0C04543g

Location

Species Yarrowia lipolytica Positions 604760..606669
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1910 (nuc.)
Previous locus YALI0C04521g Next locus YALI0C04565g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04543g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04543gYALI0C04543g_mRNA-001YALI0C04543g_CDS-001

Nucleotide sequence

 

>YALI0C04543g
ATGTCTTCGGCAATGAGACGTATGATGGGCGCCAAAAAGGCCGCCCAGAAGCAACAGGCT
GAAGCTGAGGTTCCTGCAGACACAGCTTCTTTGGCAGAGCAGGTACAGAGCTTGAGTGTC
AAAGATGAGCCAGCCGAGATGTCACAGAGTACCCCCGAGCCTGTTCCAGAGCCTTCCGCC
GAGCCTTCTAGTTCTTCCAAGTCTTCTAGCACTTCTGAGACTTCGAAACAGGGACCAACT
GAGCCTATCAAACCAGTTCAGACGAAGCCTGCCAAGAGCAAGGCTCCTAAGACTGCACCC
GCTTCTACAGGGTCAACCGAAGAGCCCACTTCTGGAAAATCGAAAAAGAACAAAAAGGGC
AAGGAAGAAAACGCAGTGCCCACTACGCCTTTGAGCGTGTCTCCACCTCTACTCAACCCC
GAGCACGAAATCAAGCGAATCTACGGCAACATCCGACTGTGGGATGAAGACGGAACCGCA
GAAAACTTTACCAATCAGCTTACAAACAATCAGAAAAAGAACTTGGAAAAACTCAGCAGA
GTCTGGGGAGGCAAGGACAAACGAAGTGTGCCTGGAACCACTAAAAAGCTGACCCTTGTC
ACCATCAAACCCTACTGGATCCCTCAGATCAAGTCGGAAATGAGCGTGGCCCGACTCTCG
GCTGACCCAGGAGCATTCAGATTCACACATTCTGACTCCTATGCCGAGGGAGAGTTCCAA
TTTGTCCAAAGACGAGCTATCGGACAAGATTCAGCCGATCTGTTTGGTCAGTACCCCTAC
AACGTATCCACTCTGAACCAGTTGGCTGGAAACGGTATCAACACTGGTCAGGCTAGCAGT
GAGTCTGCCGACCTCATTGAACGAGCTCTGTACGTCTTCAACCGAGCTCTACTAACCTCT
TCACAGGCCGTTCTTGGCCAGTCCAAGTTCCAGTTCAAGTACGTTGAAAACAGGCAATTC
TACCGAACCCTCTACCTATACATTGACATTCTGGCGCGACGAGGATTGTGGAACACCACT
CTCGAGTTCTCCAAGCTCATCTACTCTCTGGACGATGCCGACTACGATCCCTACGGATGC
AGATACATGATGGACCATTTTGCCGTACAGGGAGGAGACACTACAGCCATCAAGTACATG
TTAGAGCAAAAACTGGCCCCTCAACTAGGCTACTCTCTTGCTCTCGCCTTACTACTTGAT
GGTAAGGATGCTGAGGCCGAACAAGCTCTCAGAACAGCGATCAAGACCTTCCCCTGGATC
GGATACACGCTCGCCGAGAGCCTGGGAACCCCACACAACCACCGATTCGACTCATCCGGC
TCCGACTCGGCCATTGAGGCCCAGTCACAGCTCTATGTGCTCAGAAACCGAACTCTGTGG
GACGATCCCAAGCCCAAGATGCTCTTCACCAAGGTCTGGGATACCGTGGCATTTGACTAT
ACCCGAAGCAAGGGACCTGCTCACTGGTACAACATGAATGAGTCGCTGAAACGTCACCTG
GTCATTTCGGGAGAGCCCACTCTGTTGAAATACGCCCAGCCTCTTGCCGAGTCTGATCTC
TATGATGATGATCCTGTTCCTCCTCGAGAAGACGTCAACGTTTACTCTTCCGGCGAGTTT
GCTGCTTCGGATGTGACTCTAGCAGGCCAGAATGACGGAACTGATCAGGCTCAGGACGGA
GAACTGGCTCCAGAGGTGGTGGCTGCTCTGGCTCAGATACAACAGCTGTGTGCCGAGGCA
GGTATGGATGTGATGGAGGCTTTCCAGATGGTTTCCATGGACGTTCCCGAAGCCATGAGA
GGGGTGCTTTTGACGGAGGTCGTCAACTCTTTTGCTGATGAGTAACGCATCAGTTGCGGC
ATGTTGTGATATATATACAAAATAATAGACAGCCACTATACACGCTGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04543g_CDS-001

Protein length: 615 aa.
Product: Conserved hypothetical protein

>YALI0C04543g_CDS-001 MSSAMRRMMGAKKAAQKQQAEAEVPADTASLAEQVQSLSVKDEPAEMSQSTPEPVPEPSA
EPSSSSKSSSTSETSKQGPTEPIKPVQTKPAKSKAPKTAPASTGSTEEPTSGKSKKNKKG
KEENAVPTTPLSVSPPLLNPEHEIKRIYGNIRLWDEDGTAENFTNQLTNNQKKNLEKLSR
VWGGKDKRSVPGTTKKLTLVTIKPYWIPQIKSEMSVARLSADPGAFRFTHSDSYAEGEFQ
FVQRRAIGQDSADLFGQYPYNVSTLNQLAGNGINTGQASSESADLIERALYVFNRALLTS
SQAVLGQSKFQFKYVENRQFYRTLYLYIDILARRGLWNTTLEFSKLIYSLDDADYDPYGC
RYMMDHFAVQGGDTTAIKYMLEQKLAPQLGYSLALALLLDGKDAEAEQALRTAIKTFPWI
GYTLAESLGTPHNHRFDSSGSDSAIEAQSQLYVLRNRTLWDDPKPKMLFTKVWDTVAFDY
TRSKGPAHWYNMNESLKRHLVISGEPTLLKYAQPLAESDLYDDDPVPPREDVNVYSSGEF
AASDVTLAGQNDGTDQAQDGELAPEVVAALAQIQQLCAEAGMDVMEAFQMVSMDVPEAMR
GVLLTEVVNSFADE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG